Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02494 ATGGATGATGTCCTTACACTGACTTGCCAATTCTGTAACTATGAGTGTGAAGCTGTGGAATTGGATGGCTTCTACTATTGCAGTAACTGCAGAGAGCAGAATCTTGATGTTGTTGACACTGGTGCCGAAGAGGGAGAAGGGATCGGTGTCGGCGGTATCTACTTGGCCAAGCACAAACGCCGAGTCTATGCTTCTTATGAGGCAATTGATGTGCCACTGTCGACACCCAAAGATTTTGGCTCGAAAGGTGTAAACTTTGACGTCTATATCAAGGAGATAAGGTTGCGGTACGTGATGGGGTTGCAGATAATGATTGAGCTTCAATGTGAAGCACTGGTGAAGGAGTTTAAGGTTACTCCTTTAATATGTGGCTTGGTTGGACCAATTTGGTTGAGGCTTGTCTCCAAGGCTGGTATTTTCGATGATAATTGGGCCGATAAAGAATTTCATGACTCTTATTTGCAGAAAGAAGGAGAATCAGAAGGCAAAAACAAAGTAGGACCTCACCATATATTTAAGTCTTTAAAGAATAGGATTCCTCTAGTGTGTACTGTTGTTGTTTCATATTTAGCATGTCATATTGCCAGGGAAGCAATCATGCCATCAGACATGATTAAGTGGGCACGCGAAGGGAAACTTCCATATTTTTCTGCTTTTGTCGAACTTGAAAGGCGAATAGGATACCCAACAATTGCATGTCCTATCAGTTCAAGTTATATGTTCAGGCCTCAGGGAGCTCTTTCGGTACATAAACTAGAGTCGCATGCTTCATCCCTTGCTCAATTTATAGGGTTACAGTTACCTCCTGTGAACTTTTATGCATTAGCTTATCGTTATCTTAAAAAATTATCTCTTCCTGTTGAAAAGATTCTTCCGTACGCTTGCCGCATTTATGAATGGTCGATTTCTCCAGATTTGTGGTTATCCTTATCCAAGGATTATTTTAGGCTACCTACTCATGTTTGTGTTGTATCGGTTTTGGTAGTAGCAATAAGGATTTTGTATAACATTAATGGTTATGGAGTGTGGGAGAAAAGTTTATCTTATAATGATAGTGCCAAAGATTCAGCTAAAGATCCAAAAGAACATAAACAACGCGAATTGGATGGTACCAGGCTTCTCCAACACCTTCACTCAATATATATTGAGATTGCAGACACGCATGAGTATTCCAAGGACTTACCTACATATCTCAAATATTGTAAGGATATTGTGTTTGCTGGATTAGAACCATCATATGGGActcatgaagaagaaaatatgaTGGAAAACCTATGGAAACATTATCAAAATAAAGAGAATACTAAACCATCAGAACCAGGAAAGCAACACAATACTTCTTTTAACCGACGACTTCTAACAAACTCTCATGATGATAATTCCTCCGAGAGTTTGTCAGAAGCCATCGGAAAATTGAAATTGGATATGGaggaaaatagattttgttaCATAGCACCTAGTGTGAAGCAGAAACAAGTGGATTATGTTCACTATGTAAGAAAGAAGGATAAAGGTGGTCTGTCCTATGTTGCTCATGCTGATTATTACATTTTGCTTCGAGCTTTTGCTAGAGTTGCATATGATGATGACATTCGGATTTTGCATATTGGTGTTTTGAACCTTGAAAGAAGACTTGCTTGGTTGGAGAAACGGATTGGTCAATGCTTGCATTTGAAACCTTCCAGTGTTTCTTGTGAGTTTTGTAGTGTTAGGGCCACTGAAAAATAG 1728 0.3866 MDDVLTLTCQFCNYECEAVELDGFYYCSNCREQNLDVVDTGAEEGEGIGVGGIYLAKHKRRVYASYEAIDVPLSTPKDFGSKGVNFDVYIKEIRLRYVMGLQIMIELQCEALVKEFKVTPLICGLVGPIWLRLVSKAGIFDDNWADKEFHDSYLQKEGESEGKNKVGPHHIFKSLKNRIPLVCTVVVSYLACHIAREAIMPSDMIKWAREGKLPYFSAFVELERRIGYPTIACPISSSYMFRPQGALSVHKLESHASSLAQFIGLQLPPVNFYALAYRYLKKLSLPVEKILPYACRIYEWSISPDLWLSLSKDYFRLPTHVCVVSVLVVAIRILYNINGYGVWEKSLSYNDSAKDSAKDPKEHKQRELDGTRLLQHLHSIYIEIADTHEYSKDLPTYLKYCKDIVFAGLEPSYGTHEEENMMENLWKHYQNKENTKPSEPGKQHNTSFNRRLLTNSHDDNSSESLSEAIGKLKLDMEENRFCYIAPSVKQKQVDYVHYVRKKDKGGLSYVAHADYYILLRAFARVAYDDDIRILHIGVLNLERRLAWLEKRIGQCLHLKPSSVSCEFCSVRATEK 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02494 575 PANTHER TATA BOX-BINDING PROTEIN-ASSOCIATED FACTOR RNA POLYMERASE I SUBUNIT B 7 570 IPR033599 GO:0001164|GO:0001188|GO:0006360|GO:0070860
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02494 Tsu-Chr2 25600302 25602677 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02494 - - mtr:MTR_4g057650 859.366