Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02473 ATGGCGCACAAATTCTCACCACATTTGAATCACACCTCATTCCTCCAAAACCCCAACCTCATTTCACATTCAAACCGCCATTTACCTCTTCAGTTCCTTGCACCTTCCCTTCTCAACAACAACGCAACTATACATTCAACAAACCAATGCATTGTGTGGTCGAATCACCGTCGATTCGGGTTCCTAACAGCTTGGGTAGTTCAAAACCACGAATTCACAGATGAATTCGAGGAAAAAGATAAAATCAGCGAGGGTTATGAAGAAGAAATAGAAGTGAAGGAATTGATTGAGCAGAGTATATGGATTCAGATGAAGGAAATTGTTTTGTTTACTGGACCTGCAATTGGACTTTGGTTGTGTGGACCGTTGATGAGTCTAATCGATACTGCGGTTGTTGGTCAGGGAAGTTCAATTGAACTAGCTGCTTTAGGTCCTGCTACTGTTTTTTGTGATTATTTGAGTTACTTGTTCATGTTTTTGTCGATTGCTACTTCAAATATGGTTGCTACTGCACTTGCTAAACAGGATAGAGAGGAAGTGCAGCATAACATATCTGTCTTGCTTTTTATTGGGTTAACATGTGGCATGGTGATGCTTTTGTTCACAAGGTTATTTGGTGCAGCAACGCTCGCAGCTTTTACTGGACCGAAGAATGTACATTTAGTACCCGCAGCTGATACATATCTCCAGATTCGAGGGTTGGCATGGCCTTGTTTACTTGTCGGATCAGTTGCTCAAAGTGCAAGTCTTGGTATGAAAGATTCTTGGGGACCTTTGAAGGCTTTGGCTGCTGCCAGTATTATAAATGGAATTGGTGATATAATTCTGTGCAACTATTTGGGCTATGGGATTGCTGGGGCCGCATGGGCTACATTGGCATCACAAGTTGTTGCTGCATATATGATGAGCCAAACTCTAATCGAGAAGGGATACAATGCATTTGCTTTCTCCATTCCTTCAGGGAAGGAATTTCTGTCAATACTAAGTCTTTCTGCTCCCGTATTTGTAACATTTACATTAAAGGTGGCTTTTTACTCTCTACTTATATATTTTGCTACATCAATGAGTACACATAAAATGGCTGCTCACCAAGTTATACTTCAAATCTACAATTTATGCACAATATGTGGTGAACCTCTCTCTCAAACCGCTCAATCATTTATGCCTGAGTTTATGTATGGAGTGAATAGGAGTTTGGCAAAGGCTCGATCTCTTCTAAGGTCTCTTTTAACTATTGGATCTGTACTTGGGCTGCTTTTTGGGATTGTTGGAACCTTTGTTCCTTGGTTATTCCCCTACATGTTTACACCTGATCAGATGGTCATCCAGGAGATGCATAGGATCCTGATTCCATACTTTTTAGCGCTAGTGGTGACACCTGCAACTGTCAGCCTGGAGGGAACGTTGCTGGCTGGGCGTGATCTAAGATTTTTAAGTTTGTCAATGAGTGGATGCTTTTGTTTGAATTCTCTAGTATTATTGTTCTTATCTAGTAAATATGGTTTGCAAGGCTGTTGGTTTGCCCTTGCTGGATTTCAATGGGCTCGGTTTTCAATGGCCCTTCTGCGCCTTCTATCTCCCAATGGTGTTTTATACTCTGAAGAAATAAGCCAGAATGAGCTGCAAAATTTGAAGACTGCATAG 1644 0.413 MAHKFSPHLNHTSFLQNPNLISHSNRHLPLQFLAPSLLNNNATIHSTNQCIVWSNHRRFGFLTAWVVQNHEFTDEFEEKDKISEGYEEEIEVKELIEQSIWIQMKEIVLFTGPAIGLWLCGPLMSLIDTAVVGQGSSIELAALGPATVFCDYLSYLFMFLSIATSNMVATALAKQDREEVQHNISVLLFIGLTCGMVMLLFTRLFGAATLAAFTGPKNVHLVPAADTYLQIRGLAWPCLLVGSVAQSASLGMKDSWGPLKALAAASIINGIGDIILCNYLGYGIAGAAWATLASQVVAAYMMSQTLIEKGYNAFAFSIPSGKEFLSILSLSAPVFVTFTLKVAFYSLLIYFATSMSTHKMAAHQVILQIYNLCTICGEPLSQTAQSFMPEFMYGVNRSLAKARSLLRSLLTIGSVLGLLFGIVGTFVPWLFPYMFTPDQMVIQEMHRILIPYFLALVVTPATVSLEGTLLAGRDLRFLSLSMSGCFCLNSLVLLFLSSKYGLQGCWFALAGFQWARFSMALLRLLSPNGVLYSEEISQNELQNLKTA 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02473 547 Pfam MatE 119 271 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Tsu02g02473 547 PANTHER PROTEIN DETOXIFICATION 46, CHLOROPLASTIC 31 536 - -
Tsu02g02473 547 CDD MATE_DinF_like 103 526 IPR044644 -
Tsu02g02473 547 PANTHER PROTEIN DETOXIFICATION 44, CHLOROPLASTIC-RELATED 31 536 IPR044644 -
Tsu02g02473 547 TIGRFAM matE: MATE efflux family protein 113 506 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02473 Tsu-Chr2 25297620 25304241 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02473 K03327 - gmx:100778835 716.072