Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02472 ATGACACTCAAACTCTCACTACACTTTCATCACACCTTTCACCTCAAAATCCTCAAACTCGCAACACCTTCTCACTTACCTCTCCACCGTTTCTACGCAACTAATTCCCTTCTTAACGACACTTTTACTATTTCTTCAAACTTAGTCCTTGCGGCGTCAAAACATCATCGTATTGGGATTTTAACCCCTTGCGCAGTTGGAAGTAATGAACAAAATGGAGAATCCGGAGATGAAGACTGCTGTGAAGAAATGGGCGAGAAAAAAGAACTAGCAGAGCAGAGTGTATGGAATCAGATGAAGGAAATTGTGAAGTTTACTGGACCAGCTATCGGGTTATGGTTATGTGATCCACTCATGAGTCTCATCGATACCGCCGTTGTTGGTCAGGGAAGTTCAACTGAGCTAGCTGCTTTAGCAGGTCCTGCTACAGTTGTTTGTGATTACATGACCTTAACTTTCATGTTTCTGTCGGTTGTTACATCAAATATAATTGCTACTGCCCTTGCTAAACAGGATAGAGAGGATGTGCAGCATCACTTGTCTATCCTGCTTTTTATTGGGTTGGCATGTGGCTTGGTGATGCTTTTGTCAACAAAGTTACTCGGTGCAGCAACACTTTCCGCTTTTACTGGGCCAAAGAATGCTCATGTGGTACCTGCAGCTAATACTTATGTGCAGATTCGAGCCTTGTCGTGGCCTGCTTTACTTGTTGGATGGGTTGCTCAGAGTGCAAGTCTTGGTATGAAAGATTCATGGGGACCCTTAAAGGCTTTGGCTGCTGCAAGTGTTATAAATGGAATTGGTGATATACTTTTGTGCAGCTTTCTAGGCTATGGTATTGCAGGGGCGGCATGGGCTACAATGGCATCACAAGTTGTTGCTTCATATATGATGATTCAAACCCTAAATAAGAGGGGATACAATGCATATGCCTTCTCTGTTCCttcaatgaatgaatttctaaCAATACTTGGTCTTGCCGCTCCTGTATATTTGTCATCAATATCAAAGGTGGCTTTCTTTTCTCTACTTATATACATTGCTACATCAATCGGTACACAAACAATGGCCgctcatcaaGTCATGATTCAAATCTACATGGCGTGTACCGTGTGGGGAGAACCTCTCTGCCAAACAGCACAATCATTTATGCCTGAGTTAATGTACGGAGTAAATAAGAGTTTGTCGAAGGCCCGATTGCTACTAAGGTCGCTTGTGATTATTGGAGCTATACTTGGAGTGTTGTTAGGGATTGTCGGAACATCTCTTCTTTGGTTATTCCCATACATATTTACATCTGATCAGATGGTCATCCAGAAGATGCATAGGACACTGATTCCGTTCTTTGTTGCACTAGCTGTGACACCCTCTACTCGCAGCCTGGAGGGAACATTGCTGGCAGGACAGGATCTAAGATTTTTTAGCTTGTCAACATGTGGATGCTTTTGTCTGGCTGCTCTAGTATTATTGGTAACAactatttatctattttctGGTGTATATATACTAATATTGCTTGAACCATtttgttgtaacttgtaa 1542 0.4105 MTLKLSLHFHHTFHLKILKLATPSHLPLHRFYATNSLLNDTFTISSNLVLAASKHHRIGILTPCAVGSNEQNGESGDEDCCEEMGEKKELAEQSVWNQMKEIVKFTGPAIGLWLCDPLMSLIDTAVVGQGSSTELAALAGPATVVCDYMTLTFMFLSVVTSNIIATALAKQDREDVQHHLSILLFIGLACGLVMLLSTKLLGAATLSAFTGPKNAHVVPAANTYVQIRALSWPALLVGWVAQSASLGMKDSWGPLKALAAASVINGIGDILLCSFLGYGIAGAAWATMASQVVASYMMIQTLNKRGYNAYAFSVPSMNEFLTILGLAAPVYLSSISKVAFFSLLIYIATSIGTQTMAAHQVMIQIYMACTVWGEPLCQTAQSFMPELMYGVNKSLSKARLLLRSLVIIGAILGVLLGIVGTSLLWLFPYIFTSDQMVIQKMHRTLIPFFVALAVTPSTRSLEGTLLAGQDLRFFSLSTCGCFCLAALVLLVTTIYLFSGVYILILLEPFCCNL 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02472 513 Pfam MatE 113 267 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Tsu02g02472 513 PANTHER PROTEIN DETOXIFICATION 44, CHLOROPLASTIC-RELATED 64 493 IPR044644 -
Tsu02g02472 513 PANTHER PROTEIN DETOXIFICATION 46, CHLOROPLASTIC 64 493 - -
Tsu02g02472 513 CDD MATE_DinF_like 98 491 IPR044644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02472 Tsu-Chr2 25246348 25250529 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02472 K03327 - mtr:MTR_4g071390 805.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g02472 02 25246348 25250529 Tsu02g02472 02 25246348 25250529 ECH