Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02467 ATGGCCTCGTCTTCACGAGCAAGGAGCAACTCGCCGTTTTCTCACCGGAAACCTACCACACCTTACTCCTCCGCTTCTTCCTTCACCGCCTCAAAGTTAATGCCACGCTCTTGCTCTTCTTCTGCCTCTTCGTTTTTCAATTCCGGTGGCGCGCCTGAAATCAGTTCCCGATCCATAGCTCCGAGTCGCGGTGGTCAAAACGAGTCAACTTATTTCGACGCGCAAGGTTATGGTTCTCCAATGGAGGAGGTAATTGTGGAGCCTATTGATTCTTCTACTCTTCGAGATAGCATTTCGGTGACGATTCGGTTTAGACCGTTGAGTGAAAGAGAGTATCAGAGAGGGGACGAGATCGCGTGGTATGCAGACGGTGATAAGATTGTGAGGAATGAGTTTAATCCAGCTACTGCTTATGCATTCGATAGAGTGTTTGGACCGCATACAAATTCTGATGAGGTGTATGATGTAGCAGCCAAACCTGTTGTGAAGGCAGCCATGGAAGGGGTCAATgGAACAGTGTTTGCCTACGGTGTGACCAGTAGTGGAAAAACACATACGATGCATGGAGACCAAAACTCTCCTGGTATCATACCATTAGCTATAAAAGATGTTTTCAGCAGTATCCAAGATACTCCCGGAAGAGAGTTCTTACTTCGAGTGTCATATCTAGAAATATACAACGAGGTGATAAATGACTTGCTTGACCCAACTGGCCAAAATTTGCGTGTTAGAGAAGATGCACAGGGTACTTATGTGGAGGGTATAAAGGAAGAAGTTGTTTTGTCTCCTGGACACGCTCTCTCCTTTATTGCTGCTGGAGAAGAGCATCGTCATGTTGGATCAAACAATTTTAATCTCTTCAGCAGCCGAAGTCACACAATTTTTACACTTATGATTGAAAGCAGCGTGCATGGTAAAGAGTACGATGGAGTGATATTCTCTCAGCTTAATTTGATTGATCTGGCTGGATCTGAAAGCTCAAAAACCGAAACAACTGgattaagaagaaaagaaggatcatatataaacaaaagtctTCTGACACTTGGAACTGTCATTGGAAAATTGAGTGAGGGGAAATCATCTCATGTTCCGTATCGAGATTCAAAGCTTACCCGCCTCCTGCAATCGTCACTTAGTGGTCATGGTCATGTATCACTTATATGCAATGTGACCCCAGCATCCAGTAATATGGAAGAAACTCACAATACCTTGAAGTTTGCAAGCAGGGCAAAGCGAGTAGAAATATACGCTTCACGTAATAAGATTATTGATGAAAAATCTCTTATTAAGAAATACCAGAGAGAAATTTCAGTTCTCAAAAGTGAACTTGATCAGCTGAAGAAGGGGATGCAACTTGGTGTCAACCATGAGGAGATTTTGACCTTAAAGCAAAAGTTAGAGGAAGGTCAGGTGAAAATGCAGTCAAGAttggaagaagaggaagaagagaaggtTGCTCTGGCGAGTAGGATCCAGAAGCTAACCAAGCTCATTCTGGTTTCATCAAAGAATGCAATTCCTGGATATCTAACTGATGCTCCTGGTCACCAGCGAGGTCACTCTGTTGGCGAGGATGATAAGTATGATGCCCTACAAGATGGATCTCTTTTGTTTGAAAGTGAGAGCCAAAAAGATGTTTCAACAGTGGCATCTGATCTGTCTCATGATGTTAGACATAGAAGAACATCGAGTAGACGAAACGAAGAGCTCTCCCCATCTAGCAGTATTATAACTGAATCAACGCAAGCTGGTGAACTGATCAGCAGAACAAGGATACCAGCAGGAGGGGTTACAATGTCTGATCAGATGGATCTCCTTGTTGAGCAAGTCAAAATGCTTGCTGGAGACATTGCATTCAGTACCAGCACTCTAAAGCGCTTGACGGAGCAGTCTGTAAATGATCCTGAAAGCTCCAGAACTCAGATTGAGCACTTGGAACAAGAAATCCAAGAAAAAAGGAAGCAAATGAGAGGTATAGAACAAAGAATAATTGAGAGTGGCGAAACTTCAGTAGCTAATACATCCCTGGTTGAAATGCAGCagACAGTCACAAGATTGATGACTCAGTGTAATGAAAAAGCATTTGAGTTGGAGATAAAATCTGCGGACAATCGTGTCCTTCAAGAACAATTAAATAGCAAGTGCTCTGAAAACAGAGAATTGCAAGAAAAGGTGAAGTTGCTAGAGCAGCAACTAGCAACAGATTCCAGCTGTACCTCACTTTTGCCTGCTGATGAGTGTGTGTCTGGAGAGCACATTGATGagttaaaaaggaaaataaagtACCAGgagattgaaaatgaaaaactaaaGCTAGAACAAGTACAATTGTCAGAAGAGAATAGTGGATTGCATGTGCAGAATCAGAAACTCTCTGAAGAAGCTTCTTATGCCAAAGAACTGGCCTCAGCTGCTGCTGTGGAGTTGAACAGTTTGGCTGGGGAGGTAACAAAACTTTCATTGCAGAATGCGAAGTTTGAAAAAGAATTGATGGCTGCTCGAAACCTGGCCAACACTCGAAGTGCTGTCACACAGACAGTTAATGGTGTTCATCGCAAGTACAATGATCAAAGATCTGGAAGGAAGGGTAGAATTTCTAGCCGTGCAAATGAAAATTTGGGACCTGGTAGAGATGAGTTGGAGTCATGGAGTCTCGAAGTTGAAGATTTGAAGATGGAACTTCAGGCTAGGAAACAACGAGAAGCAGTTCTTGAGACCGCATTGGCCGAAAAGGAAATTATGGAAGAGGAGTATAGGAACAGGGTTGAAGAGGCCAAGAAAAGAGAATCTTTGTTGGAGAATGATTTAGCAAATATGTGGGTCCTCGTTGCGAAGTTAAAGAGAGAAGCGGGTGTTGTCACAGAATCAAACATTGACAAAAAATCTGGTGACGGGGACACACATACGAATGATCCGAAAAGTAATGACATTGAAAGTAATGTTATCTCTAAGGAGCAGATTTTGGATGTATCAAAACAACCGGACAACGAAACTCCCAAGGAAGAACCTTTAGTTGTTCATCTCAAGGCACGAATGCAAGACATGAAGGAAAAAGAACTCAAGCATCTTGGTAATGGAGATACAAATTCCCATGTTTGTAAAGTGTGCTTTGAATCTTCAACTGCGGCAATTCTTCTTCCATGCCGTCATTTCTGTTTGTGTAAATCTTGTTCTCTTGCATGCTCTGAATGTCCAATATGCCGAACAAATATAGCAGATAGGCTTTTTGCTTTTACATCTTGA 3246 0.414 MASSSRARSNSPFSHRKPTTPYSSASSFTASKLMPRSCSSSASSFFNSGGAPEISSRSIAPSRGGQNESTYFDAQGYGSPMEEVIVEPIDSSTLRDSISVTIRFRPLSEREYQRGDEIAWYADGDKIVRNEFNPATAYAFDRVFGPHTNSDEVYDVAAKPVVKAAMEGVNGTVFAYGVTSSGKTHTMHGDQNSPGIIPLAIKDVFSSIQDTPGREFLLRVSYLEIYNEVINDLLDPTGQNLRVREDAQGTYVEGIKEEVVLSPGHALSFIAAGEEHRHVGSNNFNLFSSRSHTIFTLMIESSVHGKEYDGVIFSQLNLIDLAGSESSKTETTGLRRKEGSYINKSLLTLGTVIGKLSEGKSSHVPYRDSKLTRLLQSSLSGHGHVSLICNVTPASSNMEETHNTLKFASRAKRVEIYASRNKIIDEKSLIKKYQREISVLKSELDQLKKGMQLGVNHEEILTLKQKLEEGQVKMQSRLEEEEEEKVALASRIQKLTKLILVSSKNAIPGYLTDAPGHQRGHSVGEDDKYDALQDGSLLFESESQKDVSTVASDLSHDVRHRRTSSRRNEELSPSSSIITESTQAGELISRTRIPAGGVTMSDQMDLLVEQVKMLAGDIAFSTSTLKRLTEQSVNDPESSRTQIEHLEQEIQEKRKQMRGIEQRIIESGETSVANTSLVEMQQTVTRLMTQCNEKAFELEIKSADNRVLQEQLNSKCSENRELQEKVKLLEQQLATDSSCTSLLPADECVSGEHIDELKRKIKYQEIENEKLKLEQVQLSEENSGLHVQNQKLSEEASYAKELASAAAVELNSLAGEVTKLSLQNAKFEKELMAARNLANTRSAVTQTVNGVHRKYNDQRSGRKGRISSRANENLGPGRDELESWSLEVEDLKMELQARKQREAVLETALAEKEIMEEEYRNRVEEAKKRESLLENDLANMWVLVAKLKREAGVVTESNIDKKSGDGDTHTNDPKSNDIESNVISKEQILDVSKQPDNETPKEEPLVVHLKARMQDMKEKELKHLGNGDTNSHVCKVCFESSTAAILLPCRHFCLCKSCSLACSECPICRTNIADRLFAFTS 1081
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02467 1081 ProSiteProfiles Kinesin motor domain profile. 97 414 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu02g02467 1081 MobiDBLite consensus disorder prediction 552 568 - -
Tsu02g02467 1081 ProSiteProfiles Zinc finger RING-type profile. 1034 1069 IPR001841 -
Tsu02g02467 1081 SUPERFAMILY RING/U-box 1033 1073 - -
Tsu02g02467 1081 Coils Coil 464 498 - -
Tsu02g02467 1081 Gene3D Kinesin motor domain 88 445 IPR036961 -
Tsu02g02467 1081 ProSitePatterns Kinesin motor domain signature. 314 325 IPR019821 GO:0003777|GO:0005524|GO:0007018
Tsu02g02467 1081 Coils Coil 705 732 - -
Tsu02g02467 1081 Pfam Kinesin motor domain 103 414 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu02g02467 1081 MobiDBLite consensus disorder prediction 854 878 - -
Tsu02g02467 1081 MobiDBLite consensus disorder prediction 1 40 - -
Tsu02g02467 1081 Pfam Zinc finger, C3HC4 type (RING finger) 1032 1073 - -
Tsu02g02467 1081 MobiDBLite consensus disorder prediction 548 579 - -
Tsu02g02467 1081 SMART kinesin_4 95 422 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu02g02467 1081 MobiDBLite consensus disorder prediction 958 974 - -
Tsu02g02467 1081 MobiDBLite consensus disorder prediction 958 979 - -
Tsu02g02467 1081 PRINTS Kinesin heavy chain signature 168 189 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu02g02467 1081 PRINTS Kinesin heavy chain signature 315 333 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu02g02467 1081 PRINTS Kinesin heavy chain signature 364 385 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu02g02467 1081 PRINTS Kinesin heavy chain signature 282 299 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu02g02467 1081 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 97 451 IPR027417 -
Tsu02g02467 1081 PANTHER KINESIN-LIKE PROTEIN KIN-7D, MITOCHONDRIAL 57 1042 - -
Tsu02g02467 1081 PANTHER CENTROMERE PROTEIN E 57 1042 - -
Tsu02g02467 1081 Coils Coil 810 837 - -
Tsu02g02467 1081 Coils Coil 881 936 - -
Tsu02g02467 1081 Coils Coil 754 781 - -
Tsu02g02467 1081 MobiDBLite consensus disorder prediction 53 74 - -
Tsu02g02467 1081 Coils Coil 643 663 - -
Tsu02g02467 1081 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1009 1080 IPR013083 -
Tsu02g02467 1081 Coils Coil 423 450 - -
Tsu02g02467 1081 CDD KISc_CENP_E 97 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02467 Tsu-Chr2 25167691 25178661 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02467 31 1081 Miscellaneous Gene Families AT4G39050 69.815 0.0 1447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02467 K11498 - gmx:100800460 1704.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g02467 02 25167691 25178661 Tsu02g02467 02 25167691 25178661 ECH