Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02447 ATGAATCGTGAAAAGTTGATGAAGATGGCCGGTTCAGTTCGAACTGGTGGAAAGGGTACAGTTAGAAGAAAGAAGAAGGCTGTCCACAAGACAACAACTACCGATGACAAAAGGCTTCAGAGCACCCTAAAAAGAATAGGTGTCAATGCCATCCCTCAAATTGAGGAGGTCAATATCTTTAAGGATGATGTTGTTATCCAGTTCTTAAACCCCAAAGTTCAAGCATCTATTGCTGCTAATACATGGGTTGTTAGTGGTGCTCCTCAAACAAAGAAGTTGCAGGATATTCTCCCTAGCATTATCCACCAATTAGGACCAGATAATTTGGAAAACCTGAAGAAGCTAGCAGAGCAATACCAGAAGCAAGCTCCTGAAGCAGGTGCTGCTGGTTCAGCCACAGCACAAGAggagaatgatgatgatgttccagAGCTTGTCCCAGGAGAGACTTTTGAGACAGCTGCCGAGGAGGCCAAGGATAGTTAG 486 0.4239 MNREKLMKMAGSVRTGGKGTVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPQIEEVNIFKDDVVIQFLNPKVQASIAANTWVVSGAPQTKKLQDILPSIIHQLGPDNLENLKKLAEQYQKQAPEAGAAGSATAQEENDDDVPELVPGETFETAAEEAKDS 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02447 161 ProSiteProfiles NAC A/B domain profile. 33 97 IPR002715 -
Tsu02g02447 161 Gene3D - 48 104 IPR038187 -
Tsu02g02447 161 PANTHER TRANSCRIPTION FACTOR BTF3 FAMILY MEMBER 1 159 IPR039370 -
Tsu02g02447 161 Pfam NAC domain 36 91 IPR002715 -
Tsu02g02447 161 PANTHER NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT BETA 1 159 - -
Tsu02g02447 161 MobiDBLite consensus disorder prediction 1 33 - -
Tsu02g02447 161 MobiDBLite consensus disorder prediction 119 161 - -
Tsu02g02447 161 SMART NAC_2 36 91 IPR002715 -
Tsu02g02447 161 Coils Coil 109 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02447 Tsu-Chr2 25008705 25011315 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02447 K01527 - gmx:100500153 282.337