Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02422 ATGGATTACATGGACCTTGTGCAgAGTCACATTGACAGAAATGCAGATATTACAGTATCATGTGCTGCTGTAGGCGACAGCCGTGCATCTGATTATGGTTTAGTCAAGGTAGATAGCAGAGGTCGCATCATACAATTTTCAGAGAAACCTAAGGGAGCTGATCTTAAAGCAATGCAAGCAGATACCTCTCTTTTCGGATTGTCGCCCCAAGATGCATTAAGGTCACCATATATTGCATCTATGGGAGTTTATGTATTCAAGACTGATGTTTTACTCAAGCTACTGAAGTGGAGGTATCCCACATCCAATGACTTTGGATCTGAAATCATTCCAGCATCTGTCAAGGAACACAATGTCCAAGCGTTTTTCTTTGGAGACTATTGGGAAGACATTGGAAcaataaaatcattttatgaTGCTAACATGGCTCTTACTGAAGAGAGTCCAAAGTTCAAATTTTATGATCCCAAGACACCCATTTTCACATCTCCAGGATTCTTACCACCGACAAAGATTGATAAATGCAGGATTGTGGATGCAATAATCTCACATGGCTGTTTCCTAAGAGAATGTAGTGTGCAACATTCCATTGTAGGTGAACGTTCACGATTGGATTACGGCGTTGAGCTCCAGGACACTATAATGATGGGAGCAGACTATTACCAAACTGAATCTGAAATTGCTTCTGCGCTGGCAGAGGGAAAGGTTCCGATTGGGATTGGAAGGAACAGCAAAATCAGGAATTGTATAATTGACAAGAATGCTAGGATCGGGAAAGATGTCATGATCATGAACAAAGATGGTGTTCAAGAAGGAGATAGACCGGAAGATGGATTTTACATCCGATCAGGAATCACAATTGTAATGGAGAAGGCCACAATAGAAGATGGCACTGTCATATAA 903 0.4064 MDYMDLVQSHIDRNADITVSCAAVGDSRASDYGLVKVDSRGRIIQFSEKPKGADLKAMQADTSLFGLSPQDALRSPYIASMGVYVFKTDVLLKLLKWRYPTSNDFGSEIIPASVKEHNVQAFFFGDYWEDIGTIKSFYDANMALTEESPKFKFYDPKTPIFTSPGFLPPTKIDKCRIVDAIISHGCFLRECSVQHSIVGERSRLDYGVELQDTIMMGADYYQTESEIASALAEGKVPIGIGRNSKIRNCIIDKNARIGKDVMIMNKDGVQEGDRPEDGFYIRSGITIVMEKATIEDGTVI 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02422 300 PANTHER GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE-RELATED 1 300 IPR011831 GO:0005978|GO:0008878
Tsu02g02422 300 SUPERFAMILY Trimeric LpxA-like enzymes 163 300 IPR011004 -
Tsu02g02422 300 Pfam Nucleotidyl transferase 1 146 IPR005835 GO:0009058|GO:0016779
Tsu02g02422 300 SUPERFAMILY Nucleotide-diphospho-sugar transferases 1 261 IPR029044 -
Tsu02g02422 300 ProSitePatterns ADP-glucose pyrophosphorylase signature 3. 79 89 IPR005836 GO:0005978|GO:0008878
Tsu02g02422 300 PANTHER GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE 1 300 - -
Tsu02g02422 300 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 1 165 IPR029044 -
Tsu02g02422 300 Gene3D Hexapeptide repeat proteins 166 300 - -
Tsu02g02422 300 CDD LbH_G1P_AT_C 168 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02422 Tsu-Chr2 24716326 24722927 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02422 K00975 - gmx:100808791 558.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g02422 02 24716326 24722927 Tsu02g02422 02 24716326 24722927 ECH