Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02420 ATGGAGGGAACTGGAGGCAGCAGTGCCTCTGCTACTGCTGCTGCTGGACCACCTGTGAACCAATGGTTGCAGGAATTTTCGAAGCTATTTCAGCATTATTTGGATAAATCTACGCCGCACTCGACTTATAGATGGATTGGGACTTTTGTCATTGCTTCGATATATGTTTTAAGGGTTTTTTATATTCAAGGATTTTACATTGTGTCTTATGGATTGGGAATCTACATGCTGAATCTGTTGATTGGGTTTCTGTCACCTTTGGTTGATCCTGAACTTGAGCCTTCTGAGGGAGGACCTTTGCTACCAACTAAAGGATCTGATGAGTTCAAACCGTTCATTCGTCGGCTTCCTGAGTTTAAATTCTGGTATTCTTTCACAAAGGCTTTCATCATAGCATTCTTGATGACTTTCTTTTCTGTATTTGATGTTCCTGTCTTCTGGCCAATATTACTCTGTTACTGGGTTGTTCTGTTTGTCCTGACAATGAGGCGCCAAATCGCACACATGATCAAATACAGATATATTCCATTCAGCTTGGGAAAACAGAAGTACGGTGGCAAGAAATCTTATGGGAGTAGCAGCAGTGGCTCTCGTGCAGACTGA 603 0.4229 MEGTGGSSASATAAAGPPVNQWLQEFSKLFQHYLDKSTPHSTYRWIGTFVIASIYVLRVFYIQGFYIVSYGLGIYMLNLLIGFLSPLVDPELEPSEGGPLLPTKGSDEFKPFIRRLPEFKFWYSFTKAFIIAFLMTFFSVFDVPVFWPILLCYWVVLFVLTMRRQIAHMIKYRYIPFSLGKQKYGGKKSYGSSSSGSRAD 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02420 200 PIRSF AtER_Rer1p 5 195 IPR004932 GO:0016021
Tsu02g02420 200 PANTHER PROTEIN RER1 11 197 IPR004932 GO:0016021
Tsu02g02420 200 PANTHER PROTEIN RER1A 11 197 - -
Tsu02g02420 200 Pfam Rer1 family 22 185 IPR004932 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02420 Tsu-Chr2 24689029 24692248 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02420 1 200 Miscellaneous Gene Families AT4G39220 74.500 4.77e-107 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02420 - - gmx:100817031 303.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g02420 02 24689029 24692248 Tsu02g02420 02 24689029 24692248 ECH