Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02419 ATGGGGAAATCAAAAGCAAAGGGAAAGCATCGTTTAGACAAATACTATCACTTAGCCAAAGAACACGGTTACAGATCTCGAGCATCATTCAAACTCATTCAAATCAATGCAAAGTTTAATTTCCTCGAATCAGCACGTTCCGTTCTCGATCTATGTGCCGCTCCCGGAGGTTGGATGCAAGTTGCTGTTCAACGTGTTCCCGTCGATCACCTCGTTATCGGAGTTGACCTTGCTCCGATTGCACCCATCCGTGGCGCTATTGCTATTCAGGAAGATATCACGAGACCTGAATGTAAGTCACGTGTTAGGAAAATCATGAACGAAAACGGTTATCGTGCTTTTGATGTTATTCTTCATGATGGTTCTCCGAATGTTGGTGGTGCTTGGGCTCAAGAAGCTACTAGTCAAAATGCTCTTGTTATTGATGCTGTTAAATTGGCTACACAGTTTTTAGCACCTAAGGGAACTTTTGTTACCAAGATTTTCAGGTCGCAGGATTACAATTCTGTTATGTACTGTATGAAGCAGTTGTTTGAGAAGGTTGAGGTGGATAAACCGGCAGCGAGTCGTTCTGAATCTGCTGAGATATATATTTTGGGGATTAAGTATTTGGCCCCTGCTAAGATTGATCCTCGCATTCTCGATATCAAGTATCTTTTTCAGGCATCTGCTCAACCGGAAGCTAAGGTGGTGGATGTACTTAGAgacaataataaacaaaagaGGCATCGTGATGGGTATGAAGATGGGAACACAACTTTGAGGAAGGTTTCTTCAGCTGCAAATTTTATTTGGTCCGATGCTCCTTTGGAGATTCTTGGTTCAGTTACTTCCATAAGTTTTACTGATCCAGCGGATTTACCAATCAAGGATCACGATCTAACTACTGAAGAGGTAAAAGCTCTCTGTGAAGATTTGAGGGTTTTGGGGAAGCAAGACTTCAAGCATCTTCTAAAGTGGCGGATTCACATAAGAAAAGCTCTTTCTCCTGCTAAAAAGACTGAACCTGCTACTACAACCGAGGTGGAAAATGAGCATGTGGTGGATGAAGATGACAAACTACTCAATGAGATGGAGGAACTGTCAAATGCATTGGAGCGCAAGAAGAAACGTGAAAAAAAGATTTTAGCAAAGAGAAGAGCTAAGGACAAGGCACGAAAAGCAACAGGGATGCAAATGGATGCAGTAGAAGATGGTTATGTTGATCACGAGTTGTTTTCTCTTGCCTCCATTAAGGGTAAGAAGGATCTGGTAGCTGTTGACACAACTGATTATGAAGGTGGTGAGGGTGAAGTGGATGACAGTGAGAATGAACAAAACAAAGGTGGCTCAGAGCATTCATCTAGTGACTTAGATTCCGATGAAGAACGTAAAAGATATGATGAACAAATGGATGATTTCCTTGAACAAGCTTATGAGAAGTTTGTGATAAAAAGGGAAGGGACTGCAATGCAGCGGAAGCGTATTAGGAAATCCTACGACGCAGACTCCCAGCTTTTGGAGGAGGAGGCTGGTGACGACAAGGACATTGTTCAGTCAAAATATGATTCAGATGAAGATCTTCAAGAAGCTAATCCTTTGATGGTGCCACTTAATGATGGGGCAGGTCCCACCCAAGAGGAGATCACAAATATGTGGTTTAGTCAGGATGTCTTTGCTGAAGCTGTACAGGAAGGAGGCTTTGAGAAGGATGATAGTGAAAATGAGATGGATATTGATGGACCGAAGGAGAAGAAGCCCATCGCTCAAAAGATTAAAGAAAATAAGGCCGTTGCTGAAAAGATCAAAGAAAATAAGACTGTTGCTGAAAAGGTCAAAGAAAATAATACGGCTGCTTCTGTGGAGATAGATCACACTAAATCTCAAGCGTCTAAGGAAATGGATTTTGAGATTGTTCCTGCACCTGCTACTGATTCAGATGATTCGTCTTCTGACGAGTCGGAGGATGATGTTGAAAATAAAGCTGAGATATTGGCTTATGCTAAGAAGATGCTTAGGAAAAAGCAAAGGGAACAGATGCTAGATGATGCATATAACAAGTACATGTTTAACGACGAGGGATTGCCTAAATGGTTTTTAGATGAGGAAAGGAAGCACCGTGTTCCAGTCAAGCCTGTCACAAAAGAGGAAATTGCTGCAATGAAAGCACAATTTAAAGAAATTGACGCTCGCCCTGCAAAGAAGGTGGCTGAGGCCAAAGCACGAAAGAAGCGTGTTGCAATGAGGAAGCTTGAGAAAGTACGTAAGAAGGCCAATGCTATATCAGACCAGCCAGACATATCCGATCGTTCAAAGAGTAAGCAAATTGATCGACTATATAAAAACGCTGTTCCAAAAAGGCCTAAAAAGGAGTATGTAGTTGCAAAGAAAGGTGTCCAAGTTAAGACTGGCAAGGGAAAAGTCCTTGTTGATCGCAGAATGAAGAAGGATTTGAGGAAAACTGGATCGGGTAAGACGGGAAAAAGAGGTTCCAAGGGAAAGGGGGGCAAGTCTCCAAAGGGTGGCAAGGCTCCAAAGGGTAAGGTACCAAAGGGGGGCAAAGGATCTTCAAATACCTCTGCcaagaaaggaagaaaataa 2580 0.4202 MGKSKAKGKHRLDKYYHLAKEHGYRSRASFKLIQINAKFNFLESARSVLDLCAAPGGWMQVAVQRVPVDHLVIGVDLAPIAPIRGAIAIQEDITRPECKSRVRKIMNENGYRAFDVILHDGSPNVGGAWAQEATSQNALVIDAVKLATQFLAPKGTFVTKIFRSQDYNSVMYCMKQLFEKVEVDKPAASRSESAEIYILGIKYLAPAKIDPRILDIKYLFQASAQPEAKVVDVLRDNNKQKRHRDGYEDGNTTLRKVSSAANFIWSDAPLEILGSVTSISFTDPADLPIKDHDLTTEEVKALCEDLRVLGKQDFKHLLKWRIHIRKALSPAKKTEPATTTEVENEHVVDEDDKLLNEMEELSNALERKKKREKKILAKRRAKDKARKATGMQMDAVEDGYVDHELFSLASIKGKKDLVAVDTTDYEGGEGEVDDSENEQNKGGSEHSSSDLDSDEERKRYDEQMDDFLEQAYEKFVIKREGTAMQRKRIRKSYDADSQLLEEEAGDDKDIVQSKYDSDEDLQEANPLMVPLNDGAGPTQEEITNMWFSQDVFAEAVQEGGFEKDDSENEMDIDGPKEKKPIAQKIKENKAVAEKIKENKTVAEKVKENNTAASVEIDHTKSQASKEMDFEIVPAPATDSDDSSSDESEDDVENKAEILAYAKKMLRKKQREQMLDDAYNKYMFNDEGLPKWFLDEERKHRVPVKPVTKEEIAAMKAQFKEIDARPAKKVAEAKARKKRVAMRKLEKVRKKANAISDQPDISDRSKSKQIDRLYKNAVPKRPKKEYVVAKKGVQVKTGKGKVLVDRRMKKDLRKTGSGKTGKRGSKGKGGKSPKGGKAPKGKVPKGGKGSSNTSAKKGRK 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02419 859 MobiDBLite consensus disorder prediction 799 817 - -
Tsu02g02419 859 MobiDBLite consensus disorder prediction 434 458 - -
Tsu02g02419 859 Hamap Ribosomal RNA large subunit methyltransferase E [rlmE]. 8 204 IPR015507 GO:0001510|GO:0008168
Tsu02g02419 859 MobiDBLite consensus disorder prediction 425 458 - -
Tsu02g02419 859 Gene3D Vaccinia Virus protein VP39 21 209 IPR029063 -
Tsu02g02419 859 Pfam Domain of unknown function (DUF3381) 238 386 IPR024576 -
Tsu02g02419 859 MobiDBLite consensus disorder prediction 608 653 - -
Tsu02g02419 859 MobiDBLite consensus disorder prediction 818 834 - -
Tsu02g02419 859 Pfam Spb1 C-terminal domain 624 814 IPR012920 GO:0005634|GO:0006364|GO:0008168
Tsu02g02419 859 Pfam FtsJ-like methyltransferase 24 201 IPR002877 GO:0008168|GO:0032259
Tsu02g02419 859 MobiDBLite consensus disorder prediction 746 789 - -
Tsu02g02419 859 MobiDBLite consensus disorder prediction 483 538 - -
Tsu02g02419 859 MobiDBLite consensus disorder prediction 560 580 - -
Tsu02g02419 859 MobiDBLite consensus disorder prediction 740 859 - -
Tsu02g02419 859 MobiDBLite consensus disorder prediction 483 521 - -
Tsu02g02419 859 Hamap AdoMet-dependent rRNA methyltransferase <gene_name> [SPB1]. 1 821 IPR028589 GO:0008649|GO:0031167
Tsu02g02419 859 PANTHER RIBOSOMAL RNA METHYLTRANSFERASE 5 824 - -
Tsu02g02419 859 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 23 203 IPR029063 -
Tsu02g02419 859 Coils Coil 348 378 - -
Tsu02g02419 859 PANTHER RRNA METHYLTRANSFERASE-RELATED 5 824 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02419 K14857 - gmx:100790741 1172.92