Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02417 ATGATGTTAAATAATATTCAGGGTGATATAAACGATCAACATAGTTTGGTTAAGGTCATAAAACAGGTGGACATTGTAATCTCAACAGTGAGCCATGCGCAATTATCTGATCAATATAAGATCCTTGCTGCTATTAAAAAAGCTGGAAACATTAAGaGGTTTTTTCCTTCTGAGTTTGGAAATGATGTGGACCAAAATCATGGAGTGGATGAGGGAAAGGTTGTGTTTGATACTAAGGCCCAATTTCGTAGAGCCATTGAGGCTGAAGGAATTCCCCATACTTATGTGGTGGCAAACTTTCTCACTCAACACTTTCTTCCAACTTGGTCACAACTTATGGACATAGCTTCCCCATTAGATGAAGTCATTATCCTTGGGGATGGAAATATCAAATCTATTTTCAATACTGAAGAGAGTGTTGCAGCTTTCACTATTAGAACTGTTGAGGATCCAAGGACTTTGAACAAAACTCTCTATATTAGACCTCTTGTAAACACCTTGTCATACAATGACCTAATATCTCTTTGGGAGAAGAAGACAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACCTTGTCATACAATGACCTAATATCTCTTTGGGAGAAGAAGACAAGTAATACCCTTAAAAGAATTTATATTCCAGAGGAGCAAATATTGAAGATGATGGAAGAGTCACCATATCCTATAATAAAGATGGGCTTTGCAATTTGTCTGGCTGCATTTGTGAAGGGAGATCACACTAACTATGAAATTGATCCCTCAATTGGAGTAGAAGCTTCAAAACTTTATCCTGATATCAAATACACCACTTTGGATGAGTACTTTCAGGAAAATCATGATCGCACCCCATTTTACATAAATTGGTTAATATCAATTAACAAATAG 927 0.3398 MMLNNIQGDINDQHSLVKVIKQVDIVISTVSHAQLSDQYKILAAIKKAGNIKRFFPSEFGNDVDQNHGVDEGKVVFDTKAQFRRAIEAEGIPHTYVVANFLTQHFLPTWSQLMDIASPLDEVIILGDGNIKSIFNTEESVAAFTIRTVEDPRTLNKTLYIRPLVNTLSYNDLISLWEKKTXXXXXXXXXXXXXXXXXXXXXXXTLSYNDLISLWEKKTSNTLKRIYIPEEQILKMMEESPYPIIKMGFAICLAAFVKGDHTNYEIDPSIGVEASKLYPDIKYTTLDEYFQENHDRTPFYINWLISINK 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02417 308 PANTHER PINORESINOL REDUCTASE-RELATED 3 181 - -
Tsu02g02417 308 PANTHER PINORESINOL REDUCTASE-RELATED 204 290 - -
Tsu02g02417 308 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 180 IPR036291 -
Tsu02g02417 308 PANTHER PHENYLCOUMARAN BENZYLIC ETHER REDUCTASE 1 3 181 - -
Tsu02g02417 308 Pfam NmrA-like family 6 180 IPR008030 -
Tsu02g02417 308 Gene3D - 3 173 - -
Tsu02g02417 308 Gene3D - 199 298 - -
Tsu02g02417 308 PANTHER PHENYLCOUMARAN BENZYLIC ETHER REDUCTASE 1 204 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02417 Tsu-Chr2 24661128 24664319 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02417 K23050 K13266 pvu:PHAVU_011G044500g 345.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g02417 02 24661128 24664319 Tsu02g02417 02 24661128 24664319 ECH