Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02390 ATGGATGAAAATCTCATACACCGATTGGAATCGGCGGTGACGCGTTTAGAGGCAATATCATCCACCGGATTCCATCCCGCAACTTCACCGTCTGACGGTTCCGATGCGGCACACGATCCATCCATTGTTGCTTACGGCGATCTGATTGATCAATATGTCGGTAGGGTTTCAAGTGCTGCCGAGATTATTGGTGGACAGGTGTTGGAGGTTACTAATAGGGTGAAGGAAGCTTTTGCTGTTCAGAAAGAGCTTTTAATTAAGCTTAAAACCACTCAgAAACCTGACCCTGCCGGGCTTTCTGAATTTCTGAAACCATTGAATGAAGTGATCACGAAAACTGCCGCATTGACAGAAGGAAGgagatctgatttttttaatcacttgAAAGCTGCCGTTGACAGTCTTTCTGCTCTAGCATGGATTGCATTTACTGGGAAGGGCTGTGGTATGAGTATGCCCGTTGCACATGTGGAAGAAAGTTGGCAAATGGCTGAGTTTTATAGCAACAAGGTACTTGTAGAGTACAGAAACAAAGACCCAAATCATGTTGAGTGGGTCAAAGCTCTGAAAGAGTTGTATGTACCTGGATTGAGGGATTATGTTAAGAGCTTTCATGCATTAGGTCCTGTATGGAGTCAAACAGGAAAAGTAATTGTTCCATCAAAAGCTAATGCTCCTGCTGCACCTTCTGCCCCTCCTCCTCCGCCTGCATCTCTCTTTAGTTCTGAATCATCTCAGGCTTCATCTTCTAAGCCAAAAGTGGGGATGTCTGCTGTTTTTCAAGAGATTGGCACAAGAGATGTCACAGCAGGTCTGAGAAAGGTTACGGATGATATGAAGACTAAGAATCGCACAGATAGATCTGGAGTTGTTGGCAGTAGTgtaaaagaaagtcaagctagtGCACGTGCAGTTTCTAATAAAGTAGGACCTCCAAAGTTAGAACTTCAAATGGGCCGCAAGTGGGTTGTTGAGAATCAAATTGAGCAGAAAAGCTTGATCATTGAAGATTGTGATTCAAAGCAGTCTGTATATGTTTATGGATGTAAAAACTCTGTGTTGCAGATTCAAGGCAAGGTCAACAATATAACTATTGACAATTGCAAAAAGACGGGAGTTGTATTTAAGGATGTTGTTGCAGCTTTTGAGATTGTAAACAGTAATGGGGTTGAGGTTCAATGCCAGGGTTCGGCTCCTACAATTTCAGTGGATAACACTTCTGGCTGCCAGATATATCTGAGCAAAGACTCTTTAGAAACATCCATATCTACAGCAAAGTCAAGTGAGATCAATGTATTAGTTCCTAACGCTGAGTCTGATGGTGATTGGGTGGAGCATTCTTTACCGCAACAGTACATTCATGTATTCAAGGAAGGCCGATTTGAAACAACTCCAGCTTCTCACTCTGGAGGTTAA 1416 0.4181 MDENLIHRLESAVTRLEAISSTGFHPATSPSDGSDAAHDPSIVAYGDLIDQYVGRVSSAAEIIGGQVLEVTNRVKEAFAVQKELLIKLKTTQKPDPAGLSEFLKPLNEVITKTAALTEGRRSDFFNHLKAAVDSLSALAWIAFTGKGCGMSMPVAHVEESWQMAEFYSNKVLVEYRNKDPNHVEWVKALKELYVPGLRDYVKSFHALGPVWSQTGKVIVPSKANAPAAPSAPPPPPASLFSSESSQASSSKPKVGMSAVFQEIGTRDVTAGLRKVTDDMKTKNRTDRSGVVGSSVKESQASARAVSNKVGPPKLELQMGRKWVVENQIEQKSLIIEDCDSKQSVYVYGCKNSVLQIQGKVNNITIDNCKKTGVVFKDVVAAFEIVNSNGVEVQCQGSAPTISVDNTSGCQIYLSKDSLETSISTAKSSEINVLVPNAESDGDWVEHSLPQQYIHVFKEGRFETTPASHSGG 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02390 471 MobiDBLite consensus disorder prediction 286 305 - -
Tsu02g02390 471 SUPERFAMILY C-terminal domain of adenylylcyclase associated protein 311 470 IPR036223 -
Tsu02g02390 471 SUPERFAMILY N-terminal domain of adenylylcyclase associated protein, CAP 41 236 IPR036222 -
Tsu02g02390 471 Pfam Adenylate cyclase associated (CAP) C terminal 311 468 IPR013912 GO:0003779|GO:0007010
Tsu02g02390 471 PANTHER ADENYLYL CYCLASE-ASSOCIATED PROTEIN 1 471 IPR001837 GO:0003779|GO:0007010
Tsu02g02390 471 ProSiteProfiles C-CAP/cofactor C-like domain profile. 311 448 IPR017901 -
Tsu02g02390 471 MobiDBLite consensus disorder prediction 223 252 - -
Tsu02g02390 471 Gene3D - 310 470 IPR016098 -
Tsu02g02390 471 ProSitePatterns CAP protein signature 1. 5 17 IPR018106 -
Tsu02g02390 471 PANTHER ADENYLYL CYCLASE-ASSOCIATED PROTEIN 1 471 - -
Tsu02g02390 471 SMART carp 387 424 IPR006599 -
Tsu02g02390 471 SMART carp 349 386 IPR006599 -
Tsu02g02390 471 Gene3D - 41 216 IPR036222 -
Tsu02g02390 471 MobiDBLite consensus disorder prediction 274 306 - -
Tsu02g02390 471 Pfam Adenylate cyclase associated (CAP) N terminal 4 56 IPR013992 GO:0003779|GO:0007010
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02390 K17261 - gmx:100793194 712.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g02390 02 24408497 24413429 Tsu02g02390 02 24408497 24413429 ECH