Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02384 ATGGCTACAACATCCAACCTTTCATTCCTTCTTTACCTTACTCTCATCGCCACTTCCCTCTACTTTGCTGATTCGCAATCCTTCATCGGAGTAAACTACGGTCAAGTCGCCGACAACCTTCCACCTCCGGACGCCACGGCGAACCTACTAAAATCCACCTCCATCGGAAAAGTCCGTCTTTATGGCGCCGATCCAGCGATCATCAAAGCTTTAGCAAATTCCGGCATCGGAATAACCATTGGAGCTGCTAACGGCGACATTCCGAGTTTAGCATCAGATCAAAACTCAGCGACTCAGTGGGTTAACTCAAACGTGTTACCATACTACCCTGCTAGCAATATCACTCTAATCACCGTCGGTAACGAAGTTATGACCTCCGGCGACAATGGTCTCATATCACAGCTTGTCCCGGCGATTCAAAATGTCCAAAATGCCCTCAACTCGGTGTCACTCGGTGGCAATATCAAAGTATCCTCAGTACATTCTATGGCCGTGTTGACTCAGTCGGATCCTCCATCTTCCGGGTCGTTTGACCCGAATCTTAAGAACACGCTGAAACAGTTGCTTGAGTTTCAGAAGGAGAACAAAGCTCCATTCACTATTAACCCGTACCCGttttttgcttaccagagtgaCCCGAGATCCGAAACACTTGcattttgtttgtttcagcCTAATTCGGGTCGGGTTGATTCGGGTAACGGTAAACTTTACACAAACATGTTCGATGCTCAGGTTGATGCTGTACATTCAGCTTTAAGTGGAATGGGATTCGAAGACATAGAAATTGTGGTAGCTGAGACAGGATGGCCTACACGTGGGGACAATAATGAAGTTGGACCAAGTGTTGAAAATGCCAAATCCTATAATGGAAATCTTATTACACATCTTAGATCATTGGTTGGTACCCCTTTAATGCCTGGAAAATCTATTGACACATACATTTTTGCTCTCTATGATGAAGATTTAAAACCTGGTGCTGGATCTGAACGTGCTTTTGGTCTTTATAAAACTGATCTTAGTGTTGCATATGATGTTGGATTAGACAAGTCTTCCCAAAAgACTCCTCCATCAACCAATCCAAAGGCTCCAATTACTCCATCACCTAAAACAACAACACAATGGTGTGTTCCAAAATTAGGAGTCTCTGATACTGAACTGCAGGTAAATCTTGACTATGTTTGTAGTAGACAAGGCATAGATTGTGGACCAATTCAACCAGGAGCTGTTTGTTATGATCCTAATACAATAGCATCTCATGCTGCTTTTGCCATGAATCTTTATTACCAAAAGTTTGGTAGAAATCCTTGGAATTGTGATTTCTCTCAAACTGCAACTCTTACATCTCAAAATCCAAGTTACAATGCTTGCGTTTATCCAAGTGGAAGTACATGA 1395 0.4201 MATTSNLSFLLYLTLIATSLYFADSQSFIGVNYGQVADNLPPPDATANLLKSTSIGKVRLYGADPAIIKALANSGIGITIGAANGDIPSLASDQNSATQWVNSNVLPYYPASNITLITVGNEVMTSGDNGLISQLVPAIQNVQNALNSVSLGGNIKVSSVHSMAVLTQSDPPSSGSFDPNLKNTLKQLLEFQKENKAPFTINPYPFFAYQSDPRSETLAFCLFQPNSGRVDSGNGKLYTNMFDAQVDAVHSALSGMGFEDIEIVVAETGWPTRGDNNEVGPSVENAKSYNGNLITHLRSLVGTPLMPGKSIDTYIFALYDEDLKPGAGSERAFGLYKTDLSVAYDVGLDKSSQKTPPSTNPKAPITPSPKTTTQWCVPKLGVSDTELQVNLDYVCSRQGIDCGPIQPGAVCYDPNTIASHAAFAMNLYYQKFGRNPWNCDFSQTATLTSQNPSYNACVYPSGST 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02384 464 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 8 456 IPR044965 GO:0004553|GO:0005975
Tsu02g02384 464 MobiDBLite consensus disorder prediction 349 371 - -
Tsu02g02384 464 SUPERFAMILY (Trans)glycosidases 29 347 IPR017853 -
Tsu02g02384 464 Pfam X8 domain 374 446 IPR012946 -
Tsu02g02384 464 ProSitePatterns Glycosyl hydrolases family 17 signature. 261 274 IPR000490 GO:0004553|GO:0005975
Tsu02g02384 464 Gene3D - 370 460 - -
Tsu02g02384 464 MobiDBLite consensus disorder prediction 351 371 - -
Tsu02g02384 464 Pfam Glycosyl hydrolases family 17 29 346 IPR000490 GO:0004553|GO:0005975
Tsu02g02384 464 Gene3D Glycosidases 28 355 - -
Tsu02g02384 464 SMART X8_cls 374 459 IPR012946 -
Tsu02g02384 464 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE 7 8 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02384 Tsu-Chr2 24382917 24388481 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02384 23 460 Miscellaneous Gene Families AT2G16230 65.525 0.0 599
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02384 - - gmx:100778892 752.281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g02384 02 24382917 24388481 Tsu02g02384 02 24382917 24388481 ECH