Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02370 ATGGTATCTCAAGCGCTATCAGTTCCTGCAATTCCCACTTTCACTATCGCTTCTCACCGTAGAATCCCTTCCCAACTTGCGTTTTCTCACAGAAACTCCTACACGATATCTTCTTCCTTGCCAAGCCCCTATGGTCATTCATCTAAAATCGGATTATCAAGTAAAACTGGTGCTTTTCGTTTAAAACTCGATGAGAAAAATATACATGATGTTAGTACAAGTTATGGTGTAATTGAAGCCAACGGGAACCCGTCAGTATCACCAGCCATCATGACACCGGGAGGAGCCCTTGATCTCTCGTCTGTTTTGTTCAGGAATCGTATAATATTCGTAGGACAGCCAATTAACTCACAAGTGGCTCAGAGAGTTATTTCGCAGCTTGTGACTCTGGCTACTATTGATGAAGAAGCAGATATACTGATGTACATAAATTGCCCTGGTGGAAGCACTTATTCAGTGCTTGCAATTTATGATTGCATGTCTTGGataaAGCCAAAGGTTGGTACAGTATGTTTTGGAGTAGCTGCAAGCCAAGCAACACTTCTCCTTGCAGGTGGGGAGAAGGGAATGCGCTATTCAATGCCAAATGCACGCATTGTGATGAATCAACCACGGTGTGGATTTGGGGGTCATGTTGAGGATGTGCAACGTCTAGTGAATGAAGCTGTTCAATCCCGCTATAAAATGGAGAAGATGTTTTGTGCATTCACCGGACAAACATTGGAGAAGGTGCAAGAGTACACAGATAGGGACAGTTTTCTATCTGTTTCTGAGGCTTTGGAGTTTGGTCTCATTGATGGTGTCCTGGAAACACAGTATTGA 822 0.4331 MVSQALSVPAIPTFTIASHRRIPSQLAFSHRNSYTISSSLPSPYGHSSKIGLSSKTGAFRLKLDEKNIHDVSTSYGVIEANGNPSVSPAIMTPGGALDLSSVLFRNRIIFVGQPINSQVAQRVISQLVTLATIDEEADILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQATLLLAGGEKGMRYSMPNARIVMNQPRCGFGGHVEDVQRLVNEAVQSRYKMEKMFCAFTGQTLEKVQEYTDRDSFLSVSEALEFGLIDGVLETQY 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02370 273 Pfam Clp protease 97 271 IPR023562 -
Tsu02g02370 273 SUPERFAMILY ClpP/crotonase 97 271 IPR029045 -
Tsu02g02370 273 PANTHER ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 14 273 IPR023562 -
Tsu02g02370 273 PANTHER ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 6, CHLOROPLASTIC 14 273 - -
Tsu02g02370 273 CDD S14_ClpP_2 98 268 IPR001907 GO:0004176|GO:0004252|GO:0006508
Tsu02g02370 273 PRINTS Clp protease catalytic subunit P signature 98 113 IPR001907 GO:0004176|GO:0004252|GO:0006508
Tsu02g02370 273 PRINTS Clp protease catalytic subunit P signature 138 158 IPR001907 GO:0004176|GO:0004252|GO:0006508
Tsu02g02370 273 PRINTS Clp protease catalytic subunit P signature 169 186 IPR001907 GO:0004176|GO:0004252|GO:0006508
Tsu02g02370 273 PRINTS Clp protease catalytic subunit P signature 190 209 IPR001907 GO:0004176|GO:0004252|GO:0006508
Tsu02g02370 273 PRINTS Clp protease catalytic subunit P signature 247 266 IPR001907 GO:0004176|GO:0004252|GO:0006508
Tsu02g02370 273 Hamap ATP-dependent Clp protease proteolytic subunit [clpP]. 82 272 IPR001907 GO:0004176|GO:0004252|GO:0006508
Tsu02g02370 273 Gene3D - 79 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02370 Tsu-Chr2 24192247 24196483 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02370 K01358 - gmx:100799710 437.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g02370 02 24192247 24196483 Tsu02g02370 02 24192247 24196483 ECH