Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02362 ATGATTGGGCGCAGAGAAAGAGAAGGACCTTTGATGAGAAACAACCCTCATTCTCTACGCAAATCAAGGATCGTTACCGCTGTAGTAATTGGTGTTCTTATTGGATGCATCTTAGCTTTCTTTTTTCCTAATGGTTTCTTTGTTCCTTCTGCAAATCGTCATATCCCTGTTGCTGGATCCAAAACCCAGGTAAAATCAGCTGAATGTGAATCCTCTGATAGAGTCAACATGTTAAAATCAGAGTTTGTGGCAGTATCAGATAAAAATGCTGAACTGAAAAAACAAGTGAGGGAGTTGACCGAAAGGCTTCGGCTAGCAGAGCAAGGGAAAGACCAGGCTCAAAAACAGTTTCTTGCATTGGGTAAACAAGAAAAAGCTGGACCTTTTGGTACTGTCAAGGGTTTAAGAATCAATCCTACTGTTGTTCCTGATGATTCCGTGAACCCAAGATTGGCTAAGATATTAGAGAAAGTTGCAGTTAAACGAGAGATCATAGTTGCACTTGCAAACTCCAATGTGAAGGAGATGCTTGAGGTCTGGTTCACCAATATCAAGAGAGTTGGTATATCCAATTATCTAGTTGTTGCTTTAGACGATGAGATTTCCAAGTTTTGCGAATCAAATCAAGTCCCATTTTACAAAAGAGACCCAGATGATGGTATTGATACTATTGGAAAACAAGGAGGGAACCATGCTGTCTCCGGGCTTAAATTTCGTATTCTAAGAGAATTTTTGCAGTTGGGATATAGTGTTCTTCTATCAGACGTTGACATTGTATATTTGCAGAATCCTTTTGATCATCTATACCGTGATTCGGATGTCGAGTCCATGAGCGACGGTCATAACAACAGGACAGCTTATGGCTATAACGATGTGTTCGACGAACCTGCAATGGGTTGGGCTCGATACGCTCATACCATGAGGATATGGGTTTACAACTCTGGTTTCTTCTATATCAGACCAACCATTCCTTCAATTGAACTTTTAGATCGTGTTGCAACACGACTTTCCAAGGAAAATGCATGGGACCAAGCTGTTTTCAACGAGGAACTCTTTTATCCATCGCATCCTGGTTATGATGGACTTCATGCTGCTAGAAGAACTATGGATATCTATCTCTTTATGAACAGCAAGATTCTTTTCAAAACTGTGAGGAACGATGCTAACCTCAGCAAATTGAAACCGGTCATTATTCACGTGAATTACCATCCTGATAAGCTTCCACGAATGAAAGCAATTGTTGAATATTATGTTAATGGGAAGCAAGATGCTCTCAAACCTTTCCCTGATGGCTCAGATTGGTAA 1305 0.4046 MIGRREREGPLMRNNPHSLRKSRIVTAVVIGVLIGCILAFFFPNGFFVPSANRHIPVAGSKTQVKSAECESSDRVNMLKSEFVAVSDKNAELKKQVRELTERLRLAEQGKDQAQKQFLALGKQEKAGPFGTVKGLRINPTVVPDDSVNPRLAKILEKVAVKREIIVALANSNVKEMLEVWFTNIKRVGISNYLVVALDDEISKFCESNQVPFYKRDPDDGIDTIGKQGGNHAVSGLKFRILREFLQLGYSVLLSDVDIVYLQNPFDHLYRDSDVESMSDGHNNRTAYGYNDVFDEPAMGWARYAHTMRIWVYNSGFFYIRPTIPSIELLDRVATRLSKENAWDQAVFNEELFYPSHPGYDGLHAARRTMDIYLFMNSKILFKTVRNDANLSKLKPVIIHVNYHPDKLPRMKAIVEYYVNGKQDALKPFPDGSDW 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02362 434 Pfam Nucleotide-diphospho-sugar transferase 189 407 IPR005069 -
Tsu02g02362 434 PANTHER ARABINOSYLTRANSFERASE RRA1-RELATED 13 431 - -
Tsu02g02362 434 SUPERFAMILY Nucleotide-diphospho-sugar transferases 165 364 IPR029044 -
Tsu02g02362 434 Coils Coil 82 116 - -
Tsu02g02362 434 PANTHER ARABINOSYLTRANSFERASE RRA3 13 431 IPR044290 GO:0016757|GO:0080147
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02362 Tsu-Chr2 23927099 23930338 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02362 K20783 - gmx:100804189 786.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g02362 02 23927099 23930338 Tsu02g02362 02 23927099 23930338 ECH