LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tsu02g02349	ATGATGTCTTTGACAAATCCTATGATGAACAACTACTCAAATCAATGTCTTCTCAAAACCCATTTTCTCAAAGTTCCCACTTTTCATCCCTTCTTCAAATTCAATCCATACCCATATGCTTCAAACAGAACTCACAAACTCTCATTCACCATAAACTGCAACCTCAAAAACAAAGGGAAGAACTTGTTGTCTCAGAAGATTGTCTTATCAGAAGCTTCTCCTCCACCACTTACACAGGATAATGATGATATCAATGGTGGGAATGTTCCAGTGAGTTCAAAGAATAAGAAAGGATTTTATGGTGTGGTTAATAAGTTGAGCAAAAAGGTGTTGCAGATTCTATCCAATTTGCCTTTGGCTATTGGAGAAATGTTCACCATTGCTTTTTTAATGGGGTTGGGCACTTTTATTGAACAAGGTGAGAAACCTGAGTTTTATTTCCAGCACTACCCTGAAGATCATCCTGTGTTAGGATTTTTTACTTGGAGATGGATTTTCTTCCTTGGTTTTGATCACATGTATTCAGCCCCTATATTTCTTGGAATGTTGGCTCTTCTCGCCGCATCCCTTATTGCCTGCACTTACACGACACAGCTGCCACTCATCAAGGTTTCTAAAAGATGGTCGTTTATGCACTCTGCCGAGGCTATACGTAAGCAGGAATTTTCAGAATCATTGCCAAGAGCATCAATACAAGATGTTGGCACTATATTAATGGGAGCTGGATATGAGGTATTCTTGAAAGGACCAACTTTGTATGCTTTTCGTGGACTTGCTGGTCGGTTAGCCCCTGTTGGAGTTCATATAGCACTTCTGTTGATAATGGGTGGAGGAACATTAAGTGCTTCAGGGAGCTTTAGAGGTTCAGTCACTGTACCACAGGGGCTCAATTTTGTTGTCGGAGATGTTCTCGGCCCTACTGGCTTTCTTTCCATTCCAACAGATGCCTTTAATACAGAGGTTCATGTCAACAGATTCTCTATGGACTATTTTGAAAGTGGAGAGGTTTCACAGTTCCGCACCGATCTTTCCCTCTTGAACATGGACGGAAAAGAAGTAATGAGGAAAACAATTAGTGTAAATGATCCTTTAAGATATGATGGTATCACCATATACCAAACAGATTGGAGTATTTCAGCTCTGCAAATTCTCAAGGACAACGAAGGACCTTATAACTTGGCTATGGCACCTCTAAAGATCAATGGAGATAAGAAACTTTATGGCACTTTTCTACCTGTTGGTGATATTAACTCTCCTGATGTTAAGGGAATATCTATGCTTGCTCGCGACCTGCAGTCAATTGTCCTTTATGATAAGGAAGGGAAATTCGCAGGAGTTAGGAGACCAAATTCAAAGCTTCCAATCAACATTGATGGCTCAGAAATTGTCATTGTTGATGCAATAGGGAGTAGTGGCTTGGACTTGAAGACTGACCCTGGCGTGCCAGTTGTATATGCTGGATTTGGTGCTCTAATGCTTACTACTTGCATCAGCTATTTATCTCATTCACAGGTTAATCTCTACATTTTCATAATTAACACTGAGTATATGATATTATCGATGTTGCTTTCTATTTTTAGATTTTCCAGACAAATGTCGTATGCATGA	1608	0.3986	MMSLTNPMMNNYSNQCLLKTHFLKVPTFHPFFKFNPYPYASNRTHKLSFTINCNLKNKGKNLLSQKIVLSEASPPPLTQDNDDINGGNVPVSSKNKKGFYGVVNKLSKKVLQILSNLPLAIGEMFTIAFLMGLGTFIEQGEKPEFYFQHYPEDHPVLGFFTWRWIFFLGFDHMYSAPIFLGMLALLAASLIACTYTTQLPLIKVSKRWSFMHSAEAIRKQEFSESLPRASIQDVGTILMGAGYEVFLKGPTLYAFRGLAGRLAPVGVHIALLLIMGGGTLSASGSFRGSVTVPQGLNFVVGDVLGPTGFLSIPTDAFNTEVHVNRFSMDYFESGEVSQFRTDLSLLNMDGKEVMRKTISVNDPLRYDGITIYQTDWSISALQILKDNEGPYNLAMAPLKINGDKKLYGTFLPVGDINSPDVKGISMLARDLQSIVLYDKEGKFAGVRRPNSKLPINIDGSEIVIVDAIGSSGLDLKTDPGVPVVYAGFGALMLTTCISYLSHSQVNLYIFIINTEYMILSMLLSIFRFSRQMSYA	535

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tsu02g02349	535	Pfam	ResB-like family	419	505	IPR007816	-
	Tsu02g02349	535	Pfam	ResB-like family	119	383	IPR007816	-
	Tsu02g02349	535	Hamap	Cytochrome c biogenesis protein Ccs1 [ccs1].	107	530	IPR023494	-
	Tsu02g02349	535	PANTHER	CYTOCHROME C BIOGENESIS PROTEIN CCS1, CHLOROPLASTIC	73	506	IPR023494	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Tsu02g02349	21	505	Miscellaneous Gene Families	AT1G49380	69.758	0.0	699

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tsu02g02349	K07399		-	gmx:100807003	823.157

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Tsu02g02349	02	23830920	23835046	Tsu02g02349	02	23830920	23835046	ECH