Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02334 ATGGAAGAGAACAAGAAAATTGTTGGTTTCACAGAAGAGCAAGAAGCTCTAGTGGTGAAGTCATGGAATGCAATCAAGAACAGTTCTGGAGACCTTAGTCTCAAGTTTTTCACCAAAATACTGGAGATTGCCCCAGCAGCTAAAcaaatgttttcatttttgaaagATTCAAATGTTCCTTTGGACCAAAATCCTAAGCTCAGGCCACATGCAATGTCTGTCTTTCTCATGACATGTGAATCAGCAGTTCAACTGAGGAAGGCTGGTAAAGTCACAGTAAGAGAATCAAATTTAAAGAAGTTGGGTGCCACCCATTTCAAAACTGGTGTACAAGATGAACATTTTGAGATAACAAAGCAAGCACTTTTGGAGACAATAGAAGAAGCAGTGCCTgaaatgtggtcagaagctatgaAAAATGCATGGGGAGAAGCTCATGATCAACTAGCCAATGCCATCAAAGCTGAAATGAAAGAAGCTCATGATCAACACGCCAATTTGATAATTAACATGGAAGAGAACAAAGGAAGTTGTTTTACAGAAGAGCAAGAAGCTCTTGTGGTGAAGTCATGGAATGCAATCAAGAACAACTCTGGAGATCTCAGTCTCAAGTTTTTCAAGAAGATACTGGAGATTGCTCCACCAGCTAAGCAATTATTTTCATTCTTAAAAGATTCAAATGTTCCTTTGGAGCAAAATCCTAAGCTCAAGCCTCATGCCATGTCTGTCTTTCTCATGGTAAGCTTACTTAACAGTCAACATCATCcattaatttattaa 780 0.3667 MEENKKIVGFTEEQEALVVKSWNAIKNSSGDLSLKFFTKILEIAPAAKQMFSFLKDSNVPLDQNPKLRPHAMSVFLMTCESAVQLRKAGKVTVRESNLKKLGATHFKTGVQDEHFEITKQALLETIEEAVPEMWSEAMKNAWGEAHDQLANAIKAEMKEAHDQHANLIINMEENKGSCFTEEQEALVVKSWNAIKNNSGDLSLKFFKKILEIAPPAKQLFSFLKDSNVPLEQNPKLKPHAMSVFLMVSLLNSQHHPLIY 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02334 259 ProSiteProfiles Globin family profile. 8 158 IPR000971 GO:0020037
Tsu02g02334 259 SUPERFAMILY Globin-like 178 248 IPR009050 -
Tsu02g02334 259 ProSitePatterns Plant hemoglobins signature. 64 75 IPR019824 GO:0019825|GO:0020037
Tsu02g02334 259 PANTHER LEGHEMOGLOBIN-RELATED 171 247 IPR001032 GO:0019825|GO:0020037
Tsu02g02334 259 Coils Coil 154 174 - -
Tsu02g02334 259 Pfam Globin 35 153 IPR000971 GO:0020037
Tsu02g02334 259 Pfam Globin 204 249 IPR000971 GO:0020037
Tsu02g02334 259 PRINTS Plant globin signature 129 155 - -
Tsu02g02334 259 PRINTS Plant globin signature 64 92 - -
Tsu02g02334 259 PRINTS Plant globin signature 11 28 - -
Tsu02g02334 259 PRINTS Plant globin signature 36 56 - -
Tsu02g02334 259 SUPERFAMILY Globin-like 5 159 IPR009050 -
Tsu02g02334 259 PANTHER LEGHEMOGLOBIN-RELATED 6 164 IPR001032 GO:0019825|GO:0020037
Tsu02g02334 259 ProSiteProfiles Globin family profile. 179 244 IPR000971 GO:0020037
Tsu02g02334 259 PANTHER NON-SYMBIOTIC HEMOGLOBIN 171 247 - -
Tsu02g02334 259 ProSitePatterns Plant hemoglobins signature. 233 244 IPR019824 GO:0019825|GO:0020037
Tsu02g02334 259 PANTHER NON-SYMBIOTIC HEMOGLOBIN 6 164 - -
Tsu02g02334 259 Gene3D Globins 178 256 IPR012292 GO:0019825|GO:0020037
Tsu02g02334 259 Gene3D Globins 8 156 IPR012292 GO:0019825|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02334 Tsu-Chr2 23718882 23721744 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02334 - - mtr:MTR_0026s0210 439.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g02334 02 23718882 23721744 Tsu02g02334 02 23718882 23721744 ECH