Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02327 ATGAATGAATTACCTGGCTCTATAGGCACAAGTGCCAGCTTCAGTCTTAGAATAGGCCAGACCTTGTTTTCATCTGCTTCTCTTCTCTTTATGTCTTTGGGGGTTGAATTCTACAGCTACACAGCTTTCtgCTATTTGGTGACAATCATGGGTTTGGTTATACCTTGGAGTTTCACATTAGCATTGGTAGATGGATACTCTGTACTGGTCAAATGCCCCATTCGCCAACCAGGAATACTGTTGATTATTGTTGTAGGAGACTTGGTACTATCAACCCTCACACTAGCAGCAGCTTCCTCAACAGCTAGTGTTGTAGATCTCCTGCTTAGTTCTCAAGGATCCTTTTGCCCTATAAAGCTTTGCTGCAGGTACAGGATATCTGCAGTTATGGCCTTTGTGTCGTGGTTTCTGTCCTTGGCATCTTCTCTTTTTAACCTTTATCTCTTACCCTCTTTGTAA 459 0.4248 MNELPGSIGTSASFSLRIGQTLFSSASLLFMSLGVEFYSYTAFCYLVTIMGLVIPWSFTLALVDGYSVLVKCPIRQPGILLIIVVGDLVLSTLTLAAASSTASVVDLLLSSQGSFCPIKLCCRYRISAVMAFVSWFLSLASSLFNLYLLPSL 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02327 152 Pfam Casparian strip membrane protein domain 9 137 IPR006702 -
Tsu02g02327 152 PANTHER CASP-LIKE PROTEIN 5C3 1 151 - -
Tsu02g02327 152 PANTHER CASP-LIKE PROTEIN 5B3 1 151 IPR045009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02327 Tsu-Chr2 23613653 23616157 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02327 - - gmx:100810360 237.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g02327 02 23613653 23616157 Tsu02g02327 02 23613653 23616157 ECH