Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02320 ATGGTGGATGTATACACTGTCAAGGTGGAAGAAGCAAGACCTGCAACTCATGAAAAGCCATCAGCAGGTCCTGTTTATAGATGCATCTATGCTAAAGATGGTTTATTGGAACTACCTTCTCAATTTCAATCCCCATGGGACTTTCTCAGGGATTCTGCTGCAAGGAGCCCAAGCAAACCAATGTTGGGTCGGCGTCACAAAACAGATTCTAAGGCTGGTCCCTATGAATGGCTCACATATGAAGAGGCTTATAATGCTGCCATCCAAATTGGTTCTGCCATGAGGACCCGTGGTGTCAATTCTGGAGACCGCTGTGGCATATACGGATCCAATTGTCCTGAATGGATACTTGCAATGGAGGCTTGTAACAGCTATGCAGTAACATATGTTCCCTTATATGACACCCTTGGTCCTAATGCTGTAGAATTTATCATAAACCATTCCGAAGTTTCGATAGCATTTGTACAACAAAGCAAGATTCCTTCTATTTTGTCATGTCTTGGTCGATGTACAAGTCTTAAAAATATTGTGAGTTTCGGTAATGTTTCAACCACACAAAAGAAAGAAGCCGAGGAACTTGGTGTATCCTGCTTCTCATGGGGAGAGTTTCTCCAGCTGggaaatttggatttggatttaccATTAAAAAACAAGACTAGCATCTGCACAATCATGTACACAAGTGGAACAACAGGTGAACCAAAAGGTGTCATTATTAAGAATGAGGCTTTCATGACTGAAGTGTTGTCTATTGACCAAATACTTTCTCTAACAGACAAAGCGGCAACCGAAGACGACGTGTACTTCTCGTTTCTTCCTCTTGCTCATGTATATGACCAGATAATGGTGACCTATAACATCTACAAGGGTTCCTCCATTGGATTTTGGCAAGGCGATATTAGATTCTTGATGGAAGATATTCAGACACTGCAACCAACTATATTTTGTGGCGTTCCTCGAATTTATGACCGTGTTTATGCTGGTATCAACAGCAAAATTTCATCGGAAGGATCATGGAAAAAGTCATTGTTTCAGTATGCATATAACTACAAATTGGGATATCTAAATACTGGTATTCCACAAGACAAAGCAGCACCTTGGATTCATAAGCTTGTGTTTGACAAGATAAAACATGCATTGGGTGGACAAGTTCGACTCATGTTATCAGGAGCTGCCCCTTTGTCTATGAATGTGGAGGAGTTTCTGAGGGTCACTTTCGGAGCTACGCTGGCACAAGGATATGGGCTCACCGAAACTTGTGCGGGGTGTTTCAGTGCAATAACCAATGTGTTTTCTATGACGGGAACTGTTGGAGTCCCCATGACAACCATTGAAGCAAGGCTTGAATCCGTGTCTGAGATGGGATATGATGCGCTCTCCGATCAACCCCGTGGAGAAATTTGCCTGAGGGGGAACACCTTGTTCTCCGGTTACCACAAGCGTCAAGATCTAACTGAAGAGGTTATGGTTGATGGTTGGTTTCATACAGGTGACATAGGAGAATGGCTGCCAAATGGAGCAATGAAAATTATTGACAGAAAAAAGAACATTTTCAAATTGTCTCAAGGAGAATATGTTGCTGTAGAGAATATTGAAAACAAGTACTTACAGTGCCCTCTAATAACTTCGATATGGGTCTACGGAAATAGTTTTGAATCTTTCTTGGTGGCAATAGTCATCCCTGAGAGACAAGCCCTCGAGGATTGGGCAGTAAAGCATAATTTGTCTGATGATTATAAATCTTTATGTGAAAATCTAAAggcaagaaaatatattttggatgAGCTCAACAGCGTTGGTCAGAAACATCAACTTAGAGGTTTTGAGCTGATAAAAGCAGTTCATCTGGAACCAACTCCCTTTGATGTGGAGAGAGATCTAATAACTCCAACATTCAAATTGAAGAGACCACAATTATTAAAACACTATAAGGATTGCATTGACCTGCTATACAAGGAAGCAAAGGGAGCAATGGTGTGA 1980 0.4061 MVDVYTVKVEEARPATHEKPSAGPVYRCIYAKDGLLELPSQFQSPWDFLRDSAARSPSKPMLGRRHKTDSKAGPYEWLTYEEAYNAAIQIGSAMRTRGVNSGDRCGIYGSNCPEWILAMEACNSYAVTYVPLYDTLGPNAVEFIINHSEVSIAFVQQSKIPSILSCLGRCTSLKNIVSFGNVSTTQKKEAEELGVSCFSWGEFLQLGNLDLDLPLKNKTSICTIMYTSGTTGEPKGVIIKNEAFMTEVLSIDQILSLTDKAATEDDVYFSFLPLAHVYDQIMVTYNIYKGSSIGFWQGDIRFLMEDIQTLQPTIFCGVPRIYDRVYAGINSKISSEGSWKKSLFQYAYNYKLGYLNTGIPQDKAAPWIHKLVFDKIKHALGGQVRLMLSGAAPLSMNVEEFLRVTFGATLAQGYGLTETCAGCFSAITNVFSMTGTVGVPMTTIEARLESVSEMGYDALSDQPRGEICLRGNTLFSGYHKRQDLTEEVMVDGWFHTGDIGEWLPNGAMKIIDRKKNIFKLSQGEYVAVENIENKYLQCPLITSIWVYGNSFESFLVAIVIPERQALEDWAVKHNLSDDYKSLCENLKARKYILDELNSVGQKHQLRGFELIKAVHLEPTPFDVERDLITPTFKLKRPQLLKHYKDCIDLLYKEAKGAMV 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02320 659 PANTHER LONG-CHAIN FATTY ACYL COA LIGASE 2 655 - -
Tsu02g02320 659 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 2 655 - -
Tsu02g02320 659 Pfam AMP-binding enzyme 50 521 IPR000873 -
Tsu02g02320 659 ProSitePatterns Putative AMP-binding domain signature. 224 235 IPR020845 -
Tsu02g02320 659 Gene3D - 32 513 IPR042099 -
Tsu02g02320 659 SUPERFAMILY Acetyl-CoA synthetase-like 38 651 - -
Tsu02g02320 659 CDD LC-FACS_euk 73 652 IPR045311 GO:0004467|GO:0006631
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02320 Tsu-Chr2 23512618 23518386 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02320 5 655 Acyl Lipid Metabolism Gene Families AT1G64400 54.281 0.0 766
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02320 K01897 - gmx:100790068 1153.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g02320 02 23512618 23518386 Tsu02g02320 02 23512618 23518386 ECH