Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02290 AGCATAGCAGGAGGTGGTTGGAAGTTGGAAGAAATGGTGTATGCTGCTGCTTCACTCTTACTCTCGCCCCCTTTCACTCCCAAAAACCCAAAATGCATTTTAGCTTTGCATTTTTTTAAATTTTCCAACAAATTCATTTTCAGACCTTCGCCAACGATTCCATCTTGTTGCTCTCAGAAAAGAGGCATTGCATTGCCGGAATATGGGCAAGATGAGAGAATTGGGACAGTGAACAATGTGTCAATCACAAACAAGCCCGTTTCATTCAGCAATTCACCAGATCTTCAACAGAGTGGCCTGCCTCCTCTAGTCAGCGCATTGAAAGCTTCAGCTGAAGAAAATGCTGCCACTTTTCACTTTCCTGGACATAACAGAGGCCACGCTGCTCCGGCTTCGATGACTCAACTCATTGGAATAAAACCATATGTTCATGATTTGCCGGAGCTTCCTGAACTTGACAACCTCTTTTGTCCCCAAGGGCCTATATTAGAAGCACAAACAAAAGCAGCCAACCTGTTTGGATCATCAGAGACATGGTTTCTTGTCGGAGGCACTACTTGTGGGATCCAGGCAGCAATAATGTCAACTTGTTCACCGGGAGAATTTCTGATTCTTCCTAGGAATTGTCATTTATCGGCTATATCTGCAATGGTATTATCTGGTGCAGTGCCTAAGTACATTGTTCCTGACTATAAAAATGATTGGGACATCGCTGGCGGTGTCACTCCATTACAGGTATTGAATGCTATCCAGGAACTAGAATTGGATGGAAAAAAAGCCGCAGCTGTTTTCATCACTTCACCTACTTATCATGGTATTTGCAGTAACTTGAATGACATATCTGAGTTGTGTCATTCACGTAAGATTCCTTTGATCGTTGATGAAGCTCATGGTGCACATCTAGGATTTCATTCTGAACTGCCTAGCTCAGCCCTCCAGCAAGGTGCTGATCTAACTGTACAGTCTACTCACAAGGTTCTATGCTCTCTTACTCAGTCATCTATGCTGCACATGTCAGGTGACATTGtagataaagaaaaaatatccaGGTGTCTCCAAACTCTCCAAACCACAAGTCCTAGCTACCTGCTTTTGGCATCTCTAGATGCTGCTAGAGCTCAACTTGGTGAAAGCCCTGAAATTGTATTCAACCAAGCGATTGCATTAGCAAATGAAGCCAAGTGCTCACTAAAACGAATCTCTGGCATCTCAGTGCTTGAGAATTCAGGCTTTCCAAACTTTCCTGCCATTGATCCTTTGCGGCTTACTGTAGGTTTTTGGGAACTTGGTTTATCAGGTTACGAAGCAGATGAAATCTTATATAGGGATTTTGGAATCGTCTGTGAACTCGTTGGGAATAAATCTATCACTTATGCACTGAATCTTGGAACTTGTAGGGACCATGTCCTAAGGCTTTTATCGGGAATAAAGCATCTAGCTGCAACATGTTCTTCCATTAAGCGGCCCAAAGACAGATTGGTTACCGATCATGCACCCTTTGATGATATAATCATGAGCTTAATCCCTAGAGATGCATTTTTTGCAAGTAAAAGAAAAGTAACAGTGAAGGAGAGCATCGGTAAGGTTTCGGGGGAGCTTATATGTCCATACCCTCCAGGCATACCCGTAATGATCCCCGGTGAGGTTATTACTGAGAGAGCTGTCAATTATCTACTCCATGTAAAAGGTAGGGGTGCTGATATTAGTGGAGCATCTGATCCCTTACTTTCTTCTATAGTTATCTGCGATGTACAGTAA 1758 0.4266 SIAGGGWKLEEMVYAAASLLLSPPFTPKNPKCILALHFFKFSNKFIFRPSPTIPSCCSQKRGIALPEYGQDERIGTVNNVSITNKPVSFSNSPDLQQSGLPPLVSALKASAEENAATFHFPGHNRGHAAPASMTQLIGIKPYVHDLPELPELDNLFCPQGPILEAQTKAANLFGSSETWFLVGGTTCGIQAAIMSTCSPGEFLILPRNCHLSAISAMVLSGAVPKYIVPDYKNDWDIAGGVTPLQVLNAIQELELDGKKAAAVFITSPTYHGICSNLNDISELCHSRKIPLIVDEAHGAHLGFHSELPSSALQQGADLTVQSTHKVLCSLTQSSMLHMSGDIVDKEKISRCLQTLQTTSPSYLLLASLDAARAQLGESPEIVFNQAIALANEAKCSLKRISGISVLENSGFPNFPAIDPLRLTVGFWELGLSGYEADEILYRDFGIVCELVGNKSITYALNLGTCRDHVLRLLSGIKHLAATCSSIKRPKDRLVTDHAPFDDIIMSLIPRDAFFASKRKVTVKESIGKVSGELICPYPPGIPVMIPGEVITERAVNYLLHVKGRGADISGASDPLLSSIVICDVQ 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02290 585 Pfam Orn/Lys/Arg decarboxylase, major domain 101 406 IPR000310 GO:0003824
Tsu02g02290 585 SUPERFAMILY Ornithine decarboxylase C-terminal domain 439 582 IPR036633 GO:0003824
Tsu02g02290 585 SUPERFAMILY PLP-dependent transferases 101 479 IPR015424 -
Tsu02g02290 585 Gene3D - 486 580 - -
Tsu02g02290 585 PANTHER ARGININE DECARBOXYLASE 79 583 - -
Tsu02g02290 585 Gene3D - 101 380 IPR015421 GO:0003824
Tsu02g02290 585 CDD Orn_deC_like 102 394 IPR000310 GO:0003824
Tsu02g02290 585 PANTHER ARGININE DECARBOXYLASE 79 583 - -
Tsu02g02290 585 Pfam Orn/Lys/Arg decarboxylase, C-terminal domain 518 562 IPR008286 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02290 Tsu-Chr2 23188707 23192076 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02290 - - mtr:MTR_4g068240 905.59