Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02258 atggggAAGCCTTTGATTTATGAGATCTTGGAAAAACCAGCCACAAGTTGTATTATAGCAATATGCAGTGCAATTTGGTTTTATATACAGAAGAAAAACATTGGTTATTCACATGTTGGTTTGAGTTATGAGACTGCTATGGAAGGACAATATTGGAGAATAATCACTTCTGCATTTTCTCATATAAGTATAATTCATCTTGTTTTTAACATGAGTGCACTTTGGAGTCTTGGTGTTGTGGAGGAATTGGATCATATTGGCCTTGGTGTTGAGTATTATTTGCAGTATACACTTGTGTTGATTGTTGTATCAGGAGTGTTGGTTTTAGCAATGTATCACTTGTTGATTCAAAGATTCAAGGTTGATTATTTTCGTCGAGTGACTGCTGTTGGATATTCGTGTGTTGTTTTTGGTTGGATGACGATTCTTTCTGTGAAGCAACCTTCTTCCAAGTTGGATCTCTTTGGATTTCTTTCGCTTCCTATTAGTTTTGCTCCGTTTGAATCGCTTGTTTTCACTTCGATTATTGTTCCTCAAGCAAGTTTTATTGGTCATTTATCTGGGATTGTTGTTGGATATGCTATTGCTTGGGGTTTGATTCATGGGATGACAAATTATTGGGCACTTTCGTTGTTGGGTTGGATTGTTCTTGTCTTTGTTTTGAGTTTGAAGAAATCTGGTGCACTTGACCTTAACTTCATTGAGATTGAATCTGTTACTGATCCATCTTTACCGTCTGTGCGGTTTTTGGGATCTGGCAACGGCAGAACCCTGCAGATGAGTACATTGCCTGATGGAAATGTTGAACTTGTCTAA 816 0.3713 MGKPLIYEILEKPATSCIIAICSAIWFYIQKKNIGYSHVGLSYETAMEGQYWRIITSAFSHISIIHLVFNMSALWSLGVVEELDHIGLGVEYYLQYTLVLIVVSGVLVLAMYHLLIQRFKVDYFRRVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFESLVFTSIIVPQASFIGHLSGIVVGYAIAWGLIHGMTNYWALSLLGWIVLVFVLSLKKSGALDLNFIEIESVTDPSLPSVRFLGSGNGRTLQMSTLPDGNVELV 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02258 271 Pfam Rhomboid family 48 201 IPR022764 GO:0004252|GO:0016021
Tsu02g02258 271 PANTHER RHOMBOID-LIKE PROTEIN 13 1 271 - -
Tsu02g02258 271 SUPERFAMILY Rhomboid-like 13 199 IPR035952 -
Tsu02g02258 271 PANTHER RHOMBOID PROTEASE 1 271 - -
Tsu02g02258 271 Gene3D - 10 200 IPR035952 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02258 Tsu-Chr2 22667256 22668926 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02258 - - gmx:100818954 488.034