Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02250 ATGGCAGTTACATCGTTGTTCCGCACTATTCATAGAGCTTCATCTGTTATTAAATCCTCGTTTTCGATCTCTCCCAGGTTAGTTGGGAGGGGTCAATTATATTCTATATGTTCTCCATTAAGGCATTGTGGGCATTTTGAGAAGCAAGGTTTTTGGTGGGGTTTGAGAGAGTTGAGTTATGGGAAGGTTAATCTTGTGATAAGGGATGGGAAGACTAAGTTTGAGGCTCATGAGGTTGAGCCTCCAAGGAAAGATAAGTGGATGACTAAGAAGAAGTTGAAGTTGcaaaggaagagagagaaggagaagaggaAAGCGGCGAATAGGAGAGATCCTAGTCGACTTGGTGTTAAAGGGAAGAAAAAGAAGCATAAGTTTGCTACTCCTGAAGAGAGAATCAAGTTCAAGATTGACAATGCGAGAGTCAAAGAAGCGTTACTCATTGAACGGCTGAAACGATACGAAGTTGCTAAAGCTCAGGGCCCCGAAGTAAAACCAGATGGCTTGACGGGGGAGGAACGGTTTTATCTGAAGAAAATGGCTCAAAAGAGTTCTAATTATCTACAAGTTGGAAGAAGAGGTTTATTTGGAGGGGTTATTCTCAATATGCATTTGCATTGGAAGAAACATGAAACTGTTAAGTGCATTTGCAAGCCTTGTAAACCTGGTCAAGTACACGAGTATGCACAAGAACTTGCCAGATTGAGTGGTGGTATTCCGATTCACATCATAGGTGATGACACTATAATATTTTATCGTGGAAAGAACTATGTACGGCCTGAGGTTATGTCACCGATAGATACGTTGTCCAAGAAAAAGGCACTTGAAAAATCCAAGTATGAGCAATCACTCGAGTCAGTGAGGCGCTTCATTGCTATTGCGGAGAAAGAATTGGAGCTATATCACAGACATGTTGCACTTTATGGCGACCCTAGCAACCGCAATCCCTTGTCTATACTCGACGGTCCAAGTAAAAGCTCCATGGAAAAGAGGAATCACGATGAAAAGAACCATGATTCGAGTAGCTATTATCTTTCAGAAACAGAAGCTGATTCCTCACAGTCGGAGCTATCAGAATCTGAAGATAACTTTGAAAATGGGAACTTGTCAATGAGTgaatcagattctgaagaaggCGACATGTTGGATTCCGATGATGATCAAGAAAGAGAAGTATATTTTAGTAAAATGCAAAATCAAGATTCATCATCAATGTCTAAACATGTCCACCAGTATAAGAATCAACATTTGTTATCTTAA 1260 0.3897 MAVTSLFRTIHRASSVIKSSFSISPRLVGRGQLYSICSPLRHCGHFEKQGFWWGLRELSYGKVNLVIRDGKTKFEAHEVEPPRKDKWMTKKKLKLQRKREKEKRKAANRRDPSRLGVKGKKKKHKFATPEERIKFKIDNARVKEALLIERLKRYEVAKAQGPEVKPDGLTGEERFYLKKMAQKSSNYLQVGRRGLFGGVILNMHLHWKKHETVKCICKPCKPGQVHEYAQELARLSGGIPIHIIGDDTIIFYRGKNYVRPEVMSPIDTLSKKKALEKSKYEQSLESVRRFIAIAEKELELYHRHVALYGDPSNRNPLSILDGPSKSSMEKRNHDEKNHDSSSYYLSETEADSSQSELSESEDNFENGNLSMSESDSEEGDMLDSDDDQEREVYFSKMQNQDSSSMSKHVHQYKNQHLLS 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02250 419 MobiDBLite consensus disorder prediction 395 419 - -
Tsu02g02250 419 MobiDBLite consensus disorder prediction 343 375 - -
Tsu02g02250 419 Gene3D - 169 267 IPR035920 -
Tsu02g02250 419 Pfam CRS1 / YhbY (CRM) domain 169 253 IPR001890 GO:0003723
Tsu02g02250 419 PANTHER GROUP II INTRON SPLICING FACTOR CRS1-LIKE 6 383 - -
Tsu02g02250 419 MobiDBLite consensus disorder prediction 326 342 - -
Tsu02g02250 419 SMART CRS1_YhbY_2 169 253 IPR001890 GO:0003723
Tsu02g02250 419 ProSiteProfiles CRM domain profile. 167 264 IPR001890 GO:0003723
Tsu02g02250 419 Coils Coil 90 110 - -
Tsu02g02250 419 MobiDBLite consensus disorder prediction 312 419 - -
Tsu02g02250 419 SUPERFAMILY YhbY-like 169 263 IPR035920 -
Tsu02g02250 419 PANTHER GROUP II INTRON SPLICING FACTOR CRS1-LIKE 6 383 IPR040286 -
Tsu02g02250 419 MobiDBLite consensus disorder prediction 91 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02250 Tsu-Chr2 22533220 22536164 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02250 - - gmx:100796393 530.791