Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02208 ATGGTAACATTTGATTCCAATGTGTTTCTGttattattctttgttttaTCCATTATTACTACTACCAATGCTGGTAATCCTCTTGCTCTTCCTCTTCATCTACAAGACTTTTCCGATTTCAATCGGAGTAGTTTTCCGCCGGGGTTTGTTTTCGGAACAGCCTCTTCTGCATTCCAGTATGAAGGTGGAGCATTTGAAGGTGGAAAAGGACCAAGTATTTGGGATACTTTCACTCATGAATACCCAGAAAAAATAAGAGATCGAGCTAATGGAGATGTAGCTTGCGACGCGTATCATCGGTACAAGGAAGATATTGCCACCATAAAGGATTTGAATATGGATGCGTATAGATTTTCGATTTCTTGGTCTAGAATCCTACCAAAAGGAAAGCTCAGTGGAGGCGTAAACCGCGAGGGAATAAACTACTACCACAATCTCATCAACGAAATATTGGCTAATGGTTTGCAACCATATGTGACACTTTTCCATTGGGACGTTCCACAAGCCTTAGAGGATGAGTATGACGGTTTTTTAAGCCGTAACATTGTAGATGATTTTAGGGACTATGCTGAACTTTGCTACAAGGAATTCGGCGATAGGGTGAAACATTGGATTACTTTGAATGAACCGTGGAGTGTGAGCATGAATGCTTATGCATATGGAAAGTTTGCACCAGGTCGATGTTCAGATTGGTTAAATCTGAATTGCATAGGAGGTGATTCGGGGATAGAACCATATTTGACTGCGCACCACCAACTTCTTGCTCATGCCGCTGCTACAAAACTGTACAAGATCAAGTATCAGGCATCTCAAAAGGGTATAATAGGTATTACCTTACTCTCTCACTGGTATGAGCCGGCATCTAAAGAGAAAGCAGATATTGATGCTGCACATCGAGGCCTCGACTTCATGTTTGGATGGTTTATGCATCCAATCACAAAAGGAAACTATCCAAAAAGCATGCGATCATTGGTGGGAAGCCGGCTACCGAAGTTCACCAAAGAAGAATCCGAGGATCTAAAAGGGTCCTTTGATTTTTTAGGCCTAAACTATTACTCATCCTATTATGCCGCTGATGCACCTCACTTACGCGATGCTAGACCAGCCATACAAACTGATTCTCTTATTAATGCTACATGTAATCATCAACTTAATTATATGTCTGCTTCCAGTTGGTTATGCATTTATCCGCAAGGACTTCGAAAACTGTTGCTTTACGTCAAGAATATGTACAATGATCCCATAATTTACATTACTGAAAATGGTCGCGATGAGTTCAACGATCCAACATTACCGCTTGAAGAAGCCCTTTTAGATACTTACAGAATTGATTACTTTTATCGTCATCTTTACTATGTTCAAAGTGCAATCACGGATGGTGTGAATGTAAAGGGATACTTCGCGTGGTCATTGTTGGATAACCATGAATGGGAATCTGGCTTCAGCTTGCGATTTGGACTCGTTTTTGTAGATTATGAAAACGACTTGAAAAGACACCGAAAACTATCGGCACATTGGTTCAAGAATTTCCTCCAAAAATCTAGTCCAgaaaggtgttttgtttaa 1566 0.3991 MVTFDSNVFLLLFFVLSIITTTNAGNPLALPLHLQDFSDFNRSSFPPGFVFGTASSAFQYEGGAFEGGKGPSIWDTFTHEYPEKIRDRANGDVACDAYHRYKEDIATIKDLNMDAYRFSISWSRILPKGKLSGGVNREGINYYHNLINEILANGLQPYVTLFHWDVPQALEDEYDGFLSRNIVDDFRDYAELCYKEFGDRVKHWITLNEPWSVSMNAYAYGKFAPGRCSDWLNLNCIGGDSGIEPYLTAHHQLLAHAAATKLYKIKYQASQKGIIGITLLSHWYEPASKEKADIDAAHRGLDFMFGWFMHPITKGNYPKSMRSLVGSRLPKFTKEESEDLKGSFDFLGLNYYSSYYAADAPHLRDARPAIQTDSLINATCNHQLNYMSASSWLCIYPQGLRKLLLYVKNMYNDPIIYITENGRDEFNDPTLPLEEALLDTYRIDYFYRHLYYVQSAITDGVNVKGYFAWSLLDNHEWESGFSLRFGLVFVDYENDLKRHRKLSAHWFKNFLQKSSPERCFV 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02208 521 Gene3D Glycosidases 28 513 - -
Tsu02g02208 521 Pfam Glycosyl hydrolase family 1 43 513 IPR001360 GO:0004553|GO:0005975
Tsu02g02208 521 PANTHER BETA-GLUCOSIDASE, PUTATIVE-RELATED 31 513 - -
Tsu02g02208 521 PANTHER GLYCOSYL HYDROLASE 31 513 IPR001360 GO:0004553|GO:0005975
Tsu02g02208 521 ProSitePatterns Glycosyl hydrolases family 1 N-terminal signature. 49 63 IPR033132 -
Tsu02g02208 521 PRINTS Glycosyl hydrolase family 1 signature 416 424 IPR001360 GO:0004553|GO:0005975
Tsu02g02208 521 PRINTS Glycosyl hydrolase family 1 signature 343 357 IPR001360 GO:0004553|GO:0005975
Tsu02g02208 521 PRINTS Glycosyl hydrolase family 1 signature 460 477 IPR001360 GO:0004553|GO:0005975
Tsu02g02208 521 PRINTS Glycosyl hydrolase family 1 signature 484 496 IPR001360 GO:0004553|GO:0005975
Tsu02g02208 521 PRINTS Glycosyl hydrolase family 1 signature 439 450 IPR001360 GO:0004553|GO:0005975
Tsu02g02208 521 SUPERFAMILY (Trans)glycosidases 33 512 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02208 Tsu-Chr2 21843971 21848728 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02208 40 514 Glycoside Hydrolase AT5G24550 53.320 0.0 534
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02208 - K01188 gmx:100801874 788.489