Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02206 ATGCAGAAGGCACCAAATCCTCATGAGTTTGCTCTTAAGGAGACCTCGCCGAACATTGGCGCGGGGGCAGTCACAAGGGACAAGCTATCCTGCACATATGACCTAGTTGAACAGATGCAATACCTCTACGTTCGTGTTGTCAAAGCCAAGGATTTACCTACAAAAGACGTCACTGGTAGTCTTGATCCCTATGTTGAAGTAAAGCTTGGCAACTACAAGGGATTGACAAAGCATTTTGAGAAAAAGTCCAATCCTCAGTGGAATCAGATTTTTGCCTTCTCCAAAGATCGAATCCAAGCTTCAGTTTTGGAGGTGATTGTCAAAGATAAGGATGTTATAGCAGATGACTTTGTAGGGAGGGTATGGTTTGATCTTAATGATATACCGAAACGTGTACCTCCAGATAGCCCTTTGGCTCCACAATGGTATAGACTTGAAGATCGAAAAGGAGAAAAAGCCAAGGGAGAGTTAATGCTTGCAGTTTGGATGGGAACTCAAGCAGATGAGGCATTTTCTGATTCATGGCACTCTGATGCTGCACTGGTTGGATCTGAAGCAGTTGCAAATATAAGATCAAAAGTTTACTTGTCTCCTAAGCTTTGGTATGTTAGGGTCAATGTAATCGAAGCTCAAGATTTGGTTCCAACTGATAAAAGCCGGTATCCTGAAGTTTTTGTGAGGGTTGGTCTAGGGAATCAGTTTTCAAGAACTAGAATGTCTCAAATTAAAACCATAAATCCTATATGGAATGAGGATTTGATGTTTGTCGCAGCTGAGCCATTCGAGGAACCCCTAGTTTTAACTGTGGAAGACAGGGTTGGACCCAACAAAGATGAAACTCTAGGAAAATGTATGATTCCTTTGCATATGGTACAAAGAAGGTTAGACCATAAGCCGGTTAACACTCGGTGGCATAATCTTGAGAAGCATTTGGTTGTTGAAGGGGAAAAGAAGGACATCAAATTCGCAAGCCGGATACATTTAAGGATATGTTTGGAAGGAGGGTACCATGTGTTGGATGAATCAACTCATCACAGTAGTGATCTTAGACCAACGGCGAAGCAGCTATGGAAGTCGGCTATCGGTATTCTAGAAGTTGGGATTATAAGTGCACAAGGGTTGATGCCGATGAAAACTAGAGATGGTAGAGGAACCACAGATGCTTATTGCGTGGCAAAATTCGGACAGAAGTGGATCCGTACTAGGACAATCGTCGATAGCTTTAGTCCAAAATGGAATGAGCAATACACTTGGGAAGTATTTGATCCATCTACTGTTATCACTATAGCTGTCTTTGATAACAATCATTTACAAGGAGGTGACAAATCAAAGGATTCTCGGATAGGGAAGGTAAGAATTAGGTTATCCACTCTTGAAACTGATAGAGTTTACACACATTCATATCCCCTTTTAGTACTTAATCCATCAGGTGTGAAGAAAACAGGTGAAGTTCAATTGGCTGTTAGGTTCACAAATTCATCTTACATCAACATGTTGTATATGTATTCCATGCCGTTGCTACCGAAAATGCACTACATCCATCCCTTATCGGTGATTCATCTCGACCATCTGAGACATCAAGCGACACAAATTGTGTCGATGAGGATGAGCCGAGCTGAGCCACCGCTAAGGAAAGAGGTTGTAGAATACATGCTTGATGTGGATTCACATATGTGGAGTATGAGAAAAAGCAAAGCTAATTTCTTCAGAATAATGAAAGTTTTCGCCAGTTTGATAGCTTTTGGGAAGTGGTTTGATCAAATTTGCAATTGGAAAAACCCGGTCACAACGATACTAATTCATATACTCTTCATAATATTAGTCCTTTACCCTGAACTAATACTTCCAACAATTTTCTTATACATGTTCATGATTGGAATTTGGAACTTTAGATGGAGGCCAAGGCACCCTCCACATATGGACACTAGACTATCCCACGCCGACGCAGCTTTTCCCGATGAATTAGACGAAGAGTTTGATTCCTTCCCTACATCGCGGTCATCGGATATCGTTAAGATGAGATACGATCGTTTAAGAAGTATCGGAGGAAAAGTTCAAAGTTTTGTAGGTGATCTTGCAACTCAAGGAGAAAGGTTTCAAAGTCTTTTAAGTTGGAGAGATCCAAGAACTACAACactttttgtaacattttgttttgttgctgctATTGTTCTCTATGTTACTCCTTTTCAAGTTGTGTTACTAATCACTGGCTTCTATGTGTTGAGACATCCTAGATTCAGACAGAAACTTCCATCAGTTCCTCTCAATTTCTTTAGGAGGTTGCCTGCTAGATCAGACAGCATGATATAA 2313 0.4042 MQKAPNPHEFALKETSPNIGAGAVTRDKLSCTYDLVEQMQYLYVRVVKAKDLPTKDVTGSLDPYVEVKLGNYKGLTKHFEKKSNPQWNQIFAFSKDRIQASVLEVIVKDKDVIADDFVGRVWFDLNDIPKRVPPDSPLAPQWYRLEDRKGEKAKGELMLAVWMGTQADEAFSDSWHSDAALVGSEAVANIRSKVYLSPKLWYVRVNVIEAQDLVPTDKSRYPEVFVRVGLGNQFSRTRMSQIKTINPIWNEDLMFVAAEPFEEPLVLTVEDRVGPNKDETLGKCMIPLHMVQRRLDHKPVNTRWHNLEKHLVVEGEKKDIKFASRIHLRICLEGGYHVLDESTHHSSDLRPTAKQLWKSAIGILEVGIISAQGLMPMKTRDGRGTTDAYCVAKFGQKWIRTRTIVDSFSPKWNEQYTWEVFDPSTVITIAVFDNNHLQGGDKSKDSRIGKVRIRLSTLETDRVYTHSYPLLVLNPSGVKKTGEVQLAVRFTNSSYINMLYMYSMPLLPKMHYIHPLSVIHLDHLRHQATQIVSMRMSRAEPPLRKEVVEYMLDVDSHMWSMRKSKANFFRIMKVFASLIAFGKWFDQICNWKNPVTTILIHILFIILVLYPELILPTIFLYMFMIGIWNFRWRPRHPPHMDTRLSHADAAFPDELDEEFDSFPTSRSSDIVKMRYDRLRSIGGKVQSFVGDLATQGERFQSLLSWRDPRTTTLFVTFCFVAAIVLYVTPFQVVLLITGFYVLRHPRFRQKLPSVPLNFFRRLPARSDSMI 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02206 770 Pfam C2 domain 201 307 IPR000008 -
Tsu02g02206 770 Pfam C2 domain 362 470 IPR000008 -
Tsu02g02206 770 Pfam C2 domain 41 133 IPR000008 -
Tsu02g02206 770 Gene3D C2 domain 339 491 IPR035892 -
Tsu02g02206 770 CDD C2B_MCTP_PRT_plant 41 165 - -
Tsu02g02206 770 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 41 178 IPR035892 -
Tsu02g02206 770 Gene3D C2 domain 186 332 IPR035892 -
Tsu02g02206 770 ProSiteProfiles C2 domain profile. 345 468 IPR000008 -
Tsu02g02206 770 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 353 IPR035892 -
Tsu02g02206 770 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 362 496 IPR035892 -
Tsu02g02206 770 Pfam Plant phosphoribosyltransferase C-terminal 615 770 IPR013583 -
Tsu02g02206 770 PANTHER C2 CALCIUM/LIPID-BINDING PLANT PHOSPHORIBOSYLTRANSFERASE FAMILY PROTEIN 6 770 - -
Tsu02g02206 770 CDD C2C_MCTP_PRT_plant 202 351 - -
Tsu02g02206 770 ProSiteProfiles C2 domain profile. 23 143 IPR000008 -
Tsu02g02206 770 PANTHER ANTHRANILATE PHOSPHORIBOSYLTRANSFERASE-LIKE PROTEIN 6 770 - -
Tsu02g02206 770 ProSiteProfiles C2 domain profile. 181 305 IPR000008 -
Tsu02g02206 770 Gene3D C2 domain 40 163 IPR035892 -
Tsu02g02206 770 SMART C2_3c 41 137 IPR000008 -
Tsu02g02206 770 SMART C2_3c 202 300 IPR000008 -
Tsu02g02206 770 SMART C2_3c 363 467 IPR000008 -
Tsu02g02206 770 CDD C2D_MCTP_PRT_plant 363 487 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02206 Tsu-Chr2 21813206 21815518 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02206 1 770 Lipid Metabolism Gene Families AT3G57880 79.199 0.0 1322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02206 - - gmx:100788273 1396.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g02206 02 21813206 21815518 Tsu02g02206 02 21813206 21815518 ECH