Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02200 ATGGCTACAACTAGTACTTCAACACAGGTTTTCAAAGACAACAACAATGGAAATTCTGAAACTACAAGACAAGAAATTAAGGTTGCTATAGCTAAAGCAGTGGAGTTAAGAGCTCTTCATGCTTCTTTAATGCGAGGGAATAGTTCATCAGTAACTGCTAAATTTCCATCTTCTTCCCCTGTTTCACGCTCTGTTTCTCAGTTCTCTGCTCATGATTACCCTGTTTTTACACCTAGCTATGGAGATGACCCAATTATAGGGTACAGTCAAAACCACATGAAAAGCCTAACAATATCAGAAAGTTGGGATGAAAGAGGATCAGAAAACAGCATAGAAACCACAGTACAAGATTACAAGGAGAAACCAAGTTCAAGAAAAGGGACACTAATACCTTATGGTTTTACCAATCAAGAATCTCACACATATCCTACTGATGACACCAAATCTGTAACTGGCTCCTGTGCAAATCACATCACTGTTCTTCAAACATCACCTACCAGTGAAAACTACAAGTATATGAGAAGAAACAGTTTAGAGGATTATTCATCAGTTTCATCCTGCAATAAATGTAAGCCTGCAATCATAACTAGTGAATTGGAAAGTGCAAGGAACAGTAAGAGCTCAAATATTGTTGTTCCTGCCACAGATTCCCACTTGTCGTTTCAGTCTGAAACAAAAAGCAAAGGGGTGATTTCGTGGTTGTTTCCTCGTCTGAAGAGGAAGCATAAGAATGAGAATTCTCCAAGTAGAGCAGAATCTGAGGATGTTTCTCAGGCTCTCAAGGACATTGGAATAATGTCAATCGAGGCATTGAAGAAAGAGCTGATAGAAGCGAACGAGAATCGAGATGTGGCTTTAGTGGAAGTTTCTGATATGAGATCTTCACTGGGGGAGCTGAGACAGAAGATGGAGTACTTGGAGAGTTACTGTGAAGAGCTGAAGAAAGTTTTGAAGCAATCCATGCAAATGCAAGCAAGGGATTCTCAACTTTGTGAACAGATTAAGCTAAGTAATCTTCCTCAAAGAGGAAAATCAATTGATGAGAGTGTTGAAAATTCAATGCCAGTGAATGAGGAAGTAATGATAGAGGGATTCTTGCAGATAGTATCAGAGTCAAGATTATCAGTGAAACAGTTCTGTAAGACCCTTATAAACACCATTGAAGAAACTGATCATTCTTTGACAGAAAATTTGAACTCACTTCTTCAACCGTATAAGCTGTCTCTAAATTCTAAGTACACAAAAGCAGTTCTATACCATTTTGAAGCTTTCATAAACCAGTCTCTCTACCAAGACTTTGAGAATTGTGTTTTCCAAAAGAACGGTTGCCCGAAATTCATAGACCGGCATGAAGACCGCCAAGCAAAATTCTCTTCATTTGTTGCCCTTCGAAATTTGAGCTGGAATGAGGTACTGAGAAAAGGAACAAAATATTACAGTGAAGAGTTTAGCAAGTTTTGTGATCAGAAAATGAGTTGTATTACCACTACTCTAAATTGGACAAGACCTTGGCCTGAACAGCTTCTTCAAGCTTTCTTTGTGGCAGCAAAATGCATGTGGTTGCTACATTTGCTCGCCTTTTCTTTCAACCCACCATTGGGAGTTTTAAGGGTTGAAGAGAATAGAACCTTTGATCATCGCTACATGGAAGATATGTCTCCAAGGTCACAGGGTCCAAGCAAAGTTAAGGTCATGGTTAATCCAGGATTTTATGTTAAGGATAGGGTTTTGAGGTGTAAGGTTCTTTGTAGGTACAAATCTACAGCTTAA 1770 0.3893 MATTSTSTQVFKDNNNGNSETTRQEIKVAIAKAVELRALHASLMRGNSSSVTAKFPSSSPVSRSVSQFSAHDYPVFTPSYGDDPIIGYSQNHMKSLTISESWDERGSENSIETTVQDYKEKPSSRKGTLIPYGFTNQESHTYPTDDTKSVTGSCANHITVLQTSPTSENYKYMRRNSLEDYSSVSSCNKCKPAIITSELESARNSKSSNIVVPATDSHLSFQSETKSKGVISWLFPRLKRKHKNENSPSRAESEDVSQALKDIGIMSIEALKKELIEANENRDVALVEVSDMRSSLGELRQKMEYLESYCEELKKVLKQSMQMQARDSQLCEQIKLSNLPQRGKSIDESVENSMPVNEEVMIEGFLQIVSESRLSVKQFCKTLINTIEETDHSLTENLNSLLQPYKLSLNSKYTKAVLYHFEAFINQSLYQDFENCVFQKNGCPKFIDRHEDRQAKFSSFVALRNLSWNEVLRKGTKYYSEEFSKFCDQKMSCITTTLNWTRPWPEQLLQAFFVAAKCMWLLHLLAFSFNPPLGVLRVEENRTFDHRYMEDMSPRSQGPSKVKVMVNPGFYVKDRVLRCKVLCRYKSTA 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02200 589 Coils Coil 268 288 - -
Tsu02g02200 589 MobiDBLite consensus disorder prediction 129 148 - -
Tsu02g02200 589 MobiDBLite consensus disorder prediction 1 22 - -
Tsu02g02200 589 MobiDBLite consensus disorder prediction 114 148 - -
Tsu02g02200 589 PANTHER - 2 589 - -
Tsu02g02200 589 PANTHER CYCLIN-DEPENDENT KINASE-LIKE PROTEIN 2 589 IPR042316 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02200 Tsu-Chr2 21751621 21754552 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02200 - - vra:106756465 910.983
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g02200 02 21751621 21754552 Tsu02g02200 02 21751621 21754552 ECH
Tsu02g05268 02 61521840 61524673 Tsu02g02200 02 21751621 21754552 PCT