Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02199 ATGGATAAATACTTGGTGCGTCAAAAGCAGTTAAAAGAAAGGATTAAGCCTCGTCGCAGGTTTAGTTGGAAAAGAAGTTTAGTTGAAGTAAATGGAAAATTTGAGCTGAATTATCGTCATGAGATGATGAGTTTGCTTATGCGTTCTTATTCTGAGGTTGGAGTTTTTCCGCATTTGTATCAAACGGAAAATGGGGCGTTTTGTCACTCTAATATTAATCGAATTCTTAGTGAGGCAAGCGGAGAACGCCTTCCTCCTTTGAGAAGAAGGAAAGGTGTATCTTCTGTAGACTTTGACAACAAGGGAATATACCTGGCGTCTGTCACAAAAGCAGGTTGCTTAACGGTTCATGACTTTGAAGCTCTTTATTGCCAGACAAACAAATTAACTCGTTTGCAGGAAGATGAAAGCAAACTTTTACTGCATCTCTCACCTGATCAACAACTTGATGTTGTCAAATGGAATCCTCTTAACCAGAATGagGTTCTTTGTGCCTCTTTGAAACGTAATGGACTACTCATATTTGATGTTGAATATATGATGTCAGAACCAATTGAAGAGTTACATACAAGACATACCGCCACAGTTAATGGATCCAACATACCCAAAGGTCTAACTGATGTTGCATTTGCGTCAAATGAATCAAGGATATTTGGTTCTGATATGCATGGTACAATTAATGTTTGGGATAGAAGAGCTAAGACTCTACCTTGCCTCGAACTAACATCTGCTTCATTTGGTACCCTTAACAGCATCCAATTAGATGCAGATAATCAGATTATTTTTGGTGCTGGGAGGCATGGGATTGTGTATGTGTGGGATATTCGTGGTGGAAGAGCACCTACTACATTCCTAAGTCACAAAGAGATTTGCCATCCACCTGTAACATCAGTCAAGTTGGCAACATTACTACAGAAGATTGGATCCTTGAAGGCACAAGCAGAAATTATTTCCAAGGAGATCCACTCTATTGGTCTTAATCCTTCGTGCCCAAATCAGTTAGCATTCCATCTAGATGATGGCTGGTCGGGCATTTTGGACATTAACAATTTTCAAGTTACACATATTCATTGCCCTCCCCCAGCTTGGTTAAATGATTCCTATGTTTCTCAAGATCAAATGGATTTAAGAAAACCTTCATGGTTATCAACATGTTCGATCTATTTGGCAGGGTCACCGTTTGATCACGGCCTTCATATGTTAGATTTCTACCCGAGTATCAGCTCACCGAGTCACGTGGATTACAAGGAGGATATACAAGAATTTTCCGGTCCAACCAaacaaaagaatcaaaatagaTTCATTCCTTTACCTGAAGAAGTTTTGTCATGTGCTGCTCATCCTTTGTACAATGCCATAGTAGCAGGAACAAAGGAAACGTCTTTGCTTGTGATTTCTCAGAAACGTAAGTCAAGCAAAGGAGAAGATTAG 1431 0.392 MDKYLVRQKQLKERIKPRRRFSWKRSLVEVNGKFELNYRHEMMSLLMRSYSEVGVFPHLYQTENGAFCHSNINRILSEASGERLPPLRRRKGVSSVDFDNKGIYLASVTKAGCLTVHDFEALYCQTNKLTRLQEDESKLLLHLSPDQQLDVVKWNPLNQNEVLCASLKRNGLLIFDVEYMMSEPIEELHTRHTATVNGSNIPKGLTDVAFASNESRIFGSDMHGTINVWDRRAKTLPCLELTSASFGTLNSIQLDADNQIIFGAGRHGIVYVWDIRGGRAPTTFLSHKEICHPPVTSVKLATLLQKIGSLKAQAEIISKEIHSIGLNPSCPNQLAFHLDDGWSGILDINNFQVTHIHCPPPAWLNDSYVSQDQMDLRKPSWLSTCSIYLAGSPFDHGLHMLDFYPSISSPSHVDYKEDIQEFSGPTKQKNQNRFIPLPEEVLSCAAHPLYNAIVAGTKETSLLVISQKRKSSKGED 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02199 476 SUPERFAMILY WD40 repeat-like 82 462 IPR036322 GO:0005515
Tsu02g02199 476 SMART WD40_4 235 274 IPR001680 GO:0005515
Tsu02g02199 476 SMART WD40_4 80 118 IPR001680 GO:0005515
Tsu02g02199 476 SMART WD40_4 181 230 IPR001680 GO:0005515
Tsu02g02199 476 Gene3D - 83 470 IPR015943 GO:0005515
Tsu02g02199 476 PANTHER TRANSDUCIN/WD40 REPEAT-LIKE SUPERFAMILY PROTEIN 1 475 - -
Tsu02g02199 476 PANTHER WD40 REPEAT PROTEIN 12, 37 1 475 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02199 - - cam:101498313 837.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g02199 02 21737730 21748209 Tsu02g02199 02 21737730 21748209 ECH