Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02163 ATGTCAATAGTACCCTTCAACGAAGATCAACACAACAACAATTTATTCGATACAAATCCCTTAACTCTATGGGACCCTTTCATGAATTTTCACTTCCCACTCCCTTCACCCATTTCCAATTTCTTCCCTGAATTCAACTTCGGATCATCCCTAAACACTCGTCTTGATTGGAGAGAGACATCCAGATCTCACGTTTGGAAGATTGTTCTTCCTGGTTTCACCAACGAAGATGTGTTGGTTGAACTTCAAGATGATAGGATGTTGCAGGTTCAACAATCTTCTGGTTCTGTTGGGAGGAATATTAGGGTCGTTGAAATTGAAGGCAGTGATTGA 333 0.4084 MSIVPFNEDQHNNNLFDTNPLTLWDPFMNFHFPLPSPISNFFPEFNFGSSLNTRLDWRETSRSHVWKIVLPGFTNEDVLVELQDDRMLQVQQSSGSVGRNIRVVEIEGSD 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02163 110 Gene3D - 12 106 IPR008978 -
Tsu02g02163 110 SUPERFAMILY HSP20-like chaperones 28 90 IPR008978 -
Tsu02g02163 110 PANTHER 17.5 KDA CLASS I HEAT SHOCK PROTEIN 1 96 - -
Tsu02g02163 110 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 1 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02163 Tsu-Chr2 21259817 21260263 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02163 K13993 - gmx:100797426 115.161