Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02145 ATGGCTGAGGGAAACACAAGTAGTAGGAGCAGTAAGTGGTCTTTGAAAGGGATGACAGCTCTAGTCACCGGTGGATCAAAAGGAATCGGATATGATATTGTGGAGCAATTAGCAGAGCTAGGGGCCACCATACACACTTGTGCTAGAAACTCAACTCAACTCAATGAATGCTTACATCAATGGGCCACAAAAGGATACAAAGTTACTGGTTCAGTCTGTGATGTGACATCTCGTGTACAAAGAGAGGAGCTCATAACTAAAGTCTCTTCTGAATTCAATGGCAAACTCAATATCCTTGTGAACAATGTGGGAACAAACATACAAAAACAGACACTAGATTTTACAGAGGAAGATTTTTCATTTCTGGTTAATACAAATCTTGAATCTGCATTTCACATAAGCCAACTTGCACATCCACTCCTAAAAGCTTCAGATTCTGCAAGCATTGTTTTCATATCCTCCATTGGTGGGGTAGCATCACTAAATGTAGGAACTATATATTGTGCAGCAAAAGGAGCAATAAACCAACTTACAAAAAATTTGGCATGTGAGTGGGCTAAAGACAACATAAGGACTAATTGTGTGGCACCTGGCCCAATTAGAACCCCTCTTGCTGAAGCACACTTAAAAGATGAAAAGCTTCTTAATGGTTTCATTACAAGAACACCTCTTGGACGAATTGGAGAACCAGAAGAGGTGTCTTCATTGGTGGCATTCCTCTGCTTACCTGCAGCCTCTTTCATAACAGGACAGATCATTTGTATAGATGGCGGGTTAACTGTCAACTGTCTCCTTATACAATAA 804 0.4055 MAEGNTSSRSSKWSLKGMTALVTGGSKGIGYDIVEQLAELGATIHTCARNSTQLNECLHQWATKGYKVTGSVCDVTSRVQREELITKVSSEFNGKLNILVNNVGTNIQKQTLDFTEEDFSFLVNTNLESAFHISQLAHPLLKASDSASIVFISSIGGVASLNVGTIYCAAKGAINQLTKNLACEWAKDNIRTNCVAPGPIRTPLAEAHLKDEKLLNGFITRTPLGRIGEPEEVSSLVAFLCLPAASFITGQIICIDGGLTVNCLLIQ 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02145 267 PRINTS Glucose/ribitol dehydrogenase family signature 188 205 IPR002347 -
Tsu02g02145 267 PRINTS Glucose/ribitol dehydrogenase family signature 141 157 IPR002347 -
Tsu02g02145 267 PRINTS Glucose/ribitol dehydrogenase family signature 167 186 IPR002347 -
Tsu02g02145 267 PRINTS Glucose/ribitol dehydrogenase family signature 19 36 IPR002347 -
Tsu02g02145 267 PRINTS Glucose/ribitol dehydrogenase family signature 94 105 IPR002347 -
Tsu02g02145 267 PRINTS Glucose/ribitol dehydrogenase family signature 223 243 IPR002347 -
Tsu02g02145 267 PANTHER NAD(P)-BINDING ROSSMANN-FOLD PROTEIN 3 265 - -
Tsu02g02145 267 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 16 261 IPR036291 -
Tsu02g02145 267 PANTHER TROPINONE REDUCTASE 3 265 IPR045000 GO:0016491
Tsu02g02145 267 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 154 182 IPR020904 GO:0016491
Tsu02g02145 267 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 94 105 IPR002347 -
Tsu02g02145 267 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 167 186 IPR002347 -
Tsu02g02145 267 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 155 IPR002347 -
Tsu02g02145 267 Pfam Enoyl-(Acyl carrier protein) reductase 26 260 - -
Tsu02g02145 267 Gene3D - 2 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02145 Tsu-Chr2 21078259 21080549 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02145 12 262 Miscellaneous Gene Families AT2G29290 64.542 2.17e-116 332
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02145 K08081 - gmx:100780806 424.861
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g02145 02 21078259 21080549 Tsu02g02145 02 21078259 21080549 ECH