Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02144 ATGCATCAAGCTTGTCTCCCAAATCCAACAGCAGCTACTCTCCCACTCCCACTCCCACTCTACTCAAACGCCAATGGTTCCACTTCCTCTTCTCCAACAACCACCTCtttcaaccttacaaaaccatCACAAACCACTCGCACAACACGAATTCGAAACCAAACCATGTTGCATTCCCACTCCCAAACACACCATAAATGGTCTCTTACCGGTATGACAGCTCTTGTCACAGGTGGAACTCGCGGAATCGGACATGCCATTGTTGAGGAATTGATAGGGTTTGGTGCCAAAGTACATACTTGTGCCAGAAATGAAGATGACCTTGGTAAATGTTTGAAGGAATGGAATAATTTGGGTTTTGAGGTTACTGGCTCAATTTGTGATGTGTCAATTCCACATCAGAGGGAAGTGCTTATGGAAGATGTTTCCTCTGTCTTCAATGGGAAACTCAACATCCTTATAAACAATGTAGGGACAAACATTCGGAAACCAATGACCGAGTTCACACCAGCAGAGTTTTCCACCCTCATTGATACCAATTTAGGATCAACCTTTCATATGTGCCAGCTTGCATATCCACTTCTCAAAGCATCAGGAGTGGGTAGTGTTGTTTTTATCTCTTCTGTTTCTGGTTTTGTCTCACTGAAGTCAATGTCTGTCCAAGGAGCAACAAAAGGGGCAATTAATCAACTTACAAAAAATCTTGCTTGTGAGTGGGCAAAAGACAACATACGGACTAATGCAGTTGCACCTTGGTACATCAAAACTTCCATGGTAGAACAgGTTTTGAGCAACAAAGAATATCTGGAAGAGGTGTACTCTCGAACTCCTCTAAGACGCCTAGGAGATCCGGCAGAAGTGTCTTCTCTTGTTGCCTTTCTTTGCTTACCAGCATCGTCATACATCACTGGCCAGATTATATGTGTTGATGGAGGAATGTCCGTGAATGGTTTCTCTCCAACACAGATCTAA 972 0.427 MHQACLPNPTAATLPLPLPLYSNANGSTSSSPTTTSFNLTKPSQTTRTTRIRNQTMLHSHSQTHHKWSLTGMTALVTGGTRGIGHAIVEELIGFGAKVHTCARNEDDLGKCLKEWNNLGFEVTGSICDVSIPHQREVLMEDVSSVFNGKLNILINNVGTNIRKPMTEFTPAEFSTLIDTNLGSTFHMCQLAYPLLKASGVGSVVFISSVSGFVSLKSMSVQGATKGAINQLTKNLACEWAKDNIRTNAVAPWYIKTSMVEQVLSNKEYLEEVYSRTPLRRLGDPAEVSSLVAFLCLPASSYITGQIICVDGGMSVNGFSPTQI 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02144 323 MobiDBLite consensus disorder prediction 23 47 - -
Tsu02g02144 323 PANTHER TROPINONE REDUCTASE-LIKE PROTEIN, CHLOROPLASTIC 43 322 - -
Tsu02g02144 323 PANTHER TROPINONE REDUCTASE 43 322 IPR045000 GO:0016491
Tsu02g02144 323 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 148 159 IPR002347 -
Tsu02g02144 323 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 201 209 IPR002347 -
Tsu02g02144 323 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 221 240 IPR002347 -
Tsu02g02144 323 Pfam Enoyl-(Acyl carrier protein) reductase 80 314 - -
Tsu02g02144 323 PRINTS Glucose/ribitol dehydrogenase family signature 73 90 IPR002347 -
Tsu02g02144 323 PRINTS Glucose/ribitol dehydrogenase family signature 148 159 IPR002347 -
Tsu02g02144 323 PRINTS Glucose/ribitol dehydrogenase family signature 195 211 IPR002347 -
Tsu02g02144 323 PRINTS Glucose/ribitol dehydrogenase family signature 221 240 IPR002347 -
Tsu02g02144 323 PRINTS Glucose/ribitol dehydrogenase family signature 242 259 IPR002347 -
Tsu02g02144 323 PRINTS Glucose/ribitol dehydrogenase family signature 277 297 IPR002347 -
Tsu02g02144 323 Gene3D - 62 317 - -
Tsu02g02144 323 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 71 315 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02144 Tsu-Chr2 21068271 21072283 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02144 66 319 Miscellaneous Gene Families AT2G29290 63.780 2.62e-118 340
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02144 K08081 - gmx:100799534 461.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g02144 02 21068271 21072283 Tsu02g02144 02 21068271 21072283 ECH