Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02129 ATGGAAGTAATGAAGCCTTGGATCGCCAGAAAAGTGACTGAGCTTCTTGGGTTTGAAGATGAAGTGCTTATTAACTTCATACATGGTCTTCTGGAAGCGAAGATAGTGAACGGGAAGGAAGTTCAAATACAAATTACTGGATTCATGGAAAAAAACACTGTCAAGTTCATGAAAGAGCTTTGGACACTTCTTCTCAGTGCACAGAAAAATGCTAGTGGCGTTCCTCAGCAGTTCTTGGATGCTAAAGAAGAAGAACTACTGAAAAAGAAGGCTGAACATGATAGAATAACAAGTGAAATTCAGAGGAAGAAAGATAAGGAATGTAAAGAGATCAGGGAGGAGAGGCTGAAGAAACTGGACGGAGGATTAGATGCGAAAGATAATGATACTGCTTCACACCCAACTTTGAAGCCCAGGGATTCAGGGAACTACATTCAGGATGGGAAAGACACTGACAAGAGGAATGGTGTTAGAGCAAGGAACAGGGTTTCTAGGTCCCCACATTCACCTGCAGTTTCCACCTCACCTCATCGAGGTTCACCTTCAAGGGCAAACAGTAAATCATTTTCGAATTCCCGAAGTCATTCAAGTGGTAGACACATGTCAAGGAGTATATCCAGATCTCCAGAGGCTCGAGGACGTTCCGTTTCTTCTGGAAGGATACAACGTTCTTCACGGCAACAGTCTATTTCTCCTCGAAGGCGCTCACCACAACGATCTCCTCATAGGAGGCCATCTTATTCAAGGAGAAGATCAAGATCTGCCTCAGACTCCAAATCTCCTCCTATACGACGTGGAGTGCATTCTCCATTTCGTCGACGCAGAACACCATCTCCTGTTAAAAGACGTAGATCCCCCTCTCCAGTGCGGCGACGTAGATCGCCCTCTCCAGTGCGACGACGTAGATCACCCTCTCCAGTACGACGACACAGATCACCACCCTCTCCAATACGGCGACGCAGATCACCACCCTCTCCAGTACGACGACACAGATCACCTTATCCTGTGCGGCGACGCAGATCACCCTCTCCTGTGCGGCGACGCAGATCACCTTCTCCTATGCGACGACGCAAATCACCTTCTCCAATGCACCTACGTAGATCACCATCACCTGTTAGACGAAGAAGGGCACCCTCGCCCATGCAACAGGGATCTCCTAGCATCCGGCGTAGGTCACCTTCACCGATGCGCCGAATACCACCAAGCCATGGGCGTAGGTCAAGCTCTCCAATGCAATCCCCCACAATGCGAAGGTATGATAGTAGAACTCCGCGGCGCAGGTCTCCGTCTCCCTTGCGGTATAGATCACCTGTTCCTGGCAAGAAAAGATCTACAAGTGCCTCCCCTAAGAGGTCTCTTTCTCGAGATCAATGGAGTTCTCAGTCTCCTGTACGTGTATCTCCATCTCCAGCCAGGAGAATTTCACCAAGTCACCAAAGAAGTCCTGTGCAGTCTTCTATGGGAAGAGTCAGGGCGCAAAAGAAGTTGTCACCGGAAGTTTATCAACCCTCTAGTCCTTTGCAGTCTGTACAAAGAGATAAAAACGGCAAAGCTTCAGGCTATAAATCTCCAGATTCAATGTCCACACCAGATAAGTCTCCAATTCGATCAATATCACCACAAGCAAGAAGTAGGACCATCAGTAAAAATAGAAGTCCACGTGAAATCCCTCTGAGGCAAACAAGAGAGAACTTAACCAAGGAAGGAAGCTTGAGTCCACCAAAGAAACCAACAAACCATAAGCCTAGGCATGACATCCCAGAGACCAGTGAAGGAGCAGAAGAGGCATATTATTCTAGAGAGCGCAGATATCCTAAATCAAATTCATCTGAAAAGAAATCAAGTCACTCCTCCCCGGTTAGTAAGCGAATAGGTTCATCAGCAAAATTTCATCATGAAGATGAGTTGTATCCTGAAAGGGCAGCCAGTCATCTGGATTCTGAGTATAATCATTATGATAACAATAAACGGAGTAAGAAAGGCCAGGATATAAAATGTGATAAATCTTCTGGCAAGGGAGATGAGTCTCCTGGTCAACAAAAGTCACCAATGAACAAAGAATTTATTTCTAGCGAGAAGCCTCATGATTCTTATGCAGCGGAAATAAAAAAATCCGATGACAAGGATCAACCCAATTCAAAATATACCAAAAGCAGTGATCAACACAACAAATCAGAAGCTGCTCAAGATTTAGTTGGAAAAGTTGATCACGTCAATCAGAGTGCTTCTTATGATTCTGTTTCTGAAGAAAGTGGTAAGCATAGAAGGGATGGAAAGGATAGGAGAAAGCATAAAAGGTCAGAGAGAAAAGTTGACTCATCTGATGAGAATGATAGTTATGATTCTGAGTTAGAGGACCGGAAAGAGGCCAAGAGGAGGAAaaaagaggagaagaagaagctGCGAAAGGAGGAAAAACATCGAAAGCGGGAAGAGCGGCGACGTAAAAGGGAAGAACGGCATGCTGAAAAGCTGAAAATGAAGAGTAAACCAGACTATATTTCAGACGACGATGAAGTTGAACGAAGGGATGATGAAGAGGCATCATATGATCCAAAGAAGCTTGAGATCGAGCTACGGAATAAGGCTCTTGAATCCCTTAAAGCAAAGAAGGGCatcaataattaa 2628 0.4486 MEVMKPWIARKVTELLGFEDEVLINFIHGLLEAKIVNGKEVQIQITGFMEKNTVKFMKELWTLLLSAQKNASGVPQQFLDAKEEELLKKKAEHDRITSEIQRKKDKECKEIREERLKKLDGGLDAKDNDTASHPTLKPRDSGNYIQDGKDTDKRNGVRARNRVSRSPHSPAVSTSPHRGSPSRANSKSFSNSRSHSSGRHMSRSISRSPEARGRSVSSGRIQRSSRQQSISPRRRSPQRSPHRRPSYSRRRSRSASDSKSPPIRRGVHSPFRRRRTPSPVKRRRSPSPVRRRRSPSPVRRRRSPSPVRRHRSPPSPIRRRRSPPSPVRRHRSPYPVRRRRSPSPVRRRRSPSPMRRRKSPSPMHLRRSPSPVRRRRAPSPMQQGSPSIRRRSPSPMRRIPPSHGRRSSSPMQSPTMRRYDSRTPRRRSPSPLRYRSPVPGKKRSTSASPKRSLSRDQWSSQSPVRVSPSPARRISPSHQRSPVQSSMGRVRAQKKLSPEVYQPSSPLQSVQRDKNGKASGYKSPDSMSTPDKSPIRSISPQARSRTISKNRSPREIPLRQTRENLTKEGSLSPPKKPTNHKPRHDIPETSEGAEEAYYSRERRYPKSNSSEKKSSHSSPVSKRIGSSAKFHHEDELYPERAASHLDSEYNHYDNNKRSKKGQDIKCDKSSGKGDESPGQQKSPMNKEFISSEKPHDSYAAEIKKSDDKDQPNSKYTKSSDQHNKSEAAQDLVGKVDHVNQSASYDSVSEESGKHRRDGKDRRKHKRSERKVDSSDENDSYDSELEDRKEAKRRKKEEKKKLRKEEKHRKREERRRKREERHAEKLKMKSKPDYISDDDEVERRDDEEASYDPKKLEIELRNKALESLKAKKGINN 875
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02129 875 MobiDBLite consensus disorder prediction 119 853 - -
Tsu02g02129 875 MobiDBLite consensus disorder prediction 816 837 - -
Tsu02g02129 875 MobiDBLite consensus disorder prediction 441 491 - -
Tsu02g02129 875 MobiDBLite consensus disorder prediction 548 562 - -
Tsu02g02129 875 SMART pwi_2 1 70 IPR002483 GO:0006397
Tsu02g02129 875 MobiDBLite consensus disorder prediction 578 610 - -
Tsu02g02129 875 MobiDBLite consensus disorder prediction 143 159 - -
Tsu02g02129 875 MobiDBLite consensus disorder prediction 266 373 - -
Tsu02g02129 875 PANTHER SERINE/ARGININE REPETITIVE MATRIX PROTEIN 1 1 387 - -
Tsu02g02129 875 SUPERFAMILY PWI domain 1 88 IPR036483 GO:0006397
Tsu02g02129 875 ProSiteProfiles PWI domain profile. 1 81 IPR002483 GO:0006397
Tsu02g02129 875 MobiDBLite consensus disorder prediction 498 547 - -
Tsu02g02129 875 Coils Coil 777 828 - -
Tsu02g02129 875 Pfam PWI domain 2 71 IPR002483 GO:0006397
Tsu02g02129 875 PANTHER SERINE/ARGININE REPETITIVE MATRIX PROTEIN 1 348 873 - -
Tsu02g02129 875 MobiDBLite consensus disorder prediction 119 134 - -
Tsu02g02129 875 MobiDBLite consensus disorder prediction 166 235 - -
Tsu02g02129 875 MobiDBLite consensus disorder prediction 767 792 - -
Tsu02g02129 875 PANTHER SERINE/ARGININE REGULATED NUCLEAR MATRIX PROTEIN 348 873 - -
Tsu02g02129 875 MobiDBLite consensus disorder prediction 688 731 - -
Tsu02g02129 875 MobiDBLite consensus disorder prediction 793 815 - -
Tsu02g02129 875 Coils Coil 79 99 - -
Tsu02g02129 875 Gene3D PWI domain 1 81 - -
Tsu02g02129 875 MobiDBLite consensus disorder prediction 626 674 - -
Tsu02g02129 875 PANTHER SERINE/ARGININE REGULATED NUCLEAR MATRIX PROTEIN 1 387 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02129 K13171 - gmx:100810238 478.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g02129 02 20967628 20973929 Tsu02g02129 02 20967628 20973929 ECH