Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02128 ATGGCATCATCATCAACACCTCTCATCAATTTCAAACTCTCTCTATTCAACTCACTTCACCATCAAAGTACAATAAACAACTCAAAATCTCCCTTCTCTACTTGTTCTATCAATCCATGCTTCATTACTTCTTCCATTAACAATCATTTGTCGATAACACGTGTCACTTATCCACTTCTTACCTCTCACTCTATTCATAACCGCAGATTCAACGTTCAACTTCAAGCACAGAAGGAGTATTCTGCTGGGAACAATTCTGAGTCAGATGCAACTTACCAAGAGGAATTTTCTTGGTCTTCTGTAATTCTTCCGTTTGTGTTCCCTGCATTGGGTGGCTTGTTATTTGGTTATGATATTGGTGCCACATCCGGTGCTACAATTTCACTGCAGTCACCTGAGCTCAGCGGTATCGCTTGGTCCAATCTTACTTCCATTCAGCTTGGTCTTGTGGTCAGTGGTTCTCTATATGGGGCTCTTTTTGGCTCACTTCTTGCATTTGCAATTGCTGACTTCATTGGGAGGAAGCGACAACTCATCGGTGCAGCCCTGTTGTATCTAGCTGGTAGTGCAATCACTGCCACTGCACCAGAACTTGGTGTTCTCTTAGCAGGAAGGCTGATTTATGGACTTGGTATAGGTCTGGCCATGCATGGAGCTCCTTTATACATTGCAGAAACTTGTCCGTCACAAATCCGTGGGACTCTAGTATCATTAAAAGAACTCTTCATTGTCTTAGGGATTCTGTTGGGTTATTTTGTGGGAAGCTTTCAGATTAGTACAGTTGGTGGATGGCGATTCATGTATGGATTTAGTGCTCCGCTTGCTGTGTTAATGGGGCTCGGAATGTGGACTCTCCCCGCCTCTCCTCGGTGGTTGCTTCTCAAAGCAGTACAAGGAAAAGGTTCTTTTCAAGATTTGAAGGAGAAGGCAATCGTTTCCCTTAGCAAATTAAGAGGCCGACCACCTGGTGACAAAGAATCTGAGAAGCAGATAGAAGAGAGCCTTGTCTCATTGAAGTCTGCCTATGAGGATCAGGAATCCGAGGCGAATTTCTTAGAGGTGTTTCAGGGTCCAAATCTGAAAGCATTCATAATTGGTGGGGGGCTAGTATTATTTCAACAGATAACAGGTCAACCTAGTGTTCTGTATTATGCAGGTCCTATTCTTCAGAGTGCTGGATTTTCTGCTGCAGCCGACGCAGCTAAAGTTTCAGTTGTTATTGGCTTATTCAAGCTAGTAATGACATCGGTTGCTGTCCTAAAAGTAGATGATTTGGGGAGAAGACCTTTGCTGATTGGAGGTGTCAGTGGCATTGCCCTATCTTTAGTTCTCCTTTCTGCTTACTATAAATTTCTCGGAGGGTTACCGGTTGTTGCTGTTGCGGCGTTACTTCTTTACGTTGGTTGCTACCAGATATCATTTGGGCCGATAAGTTGGCTTATGGTATCAGAAATTTTCCCACTTCGCACTAGAGGACGGGGGATTAGTATGGCTGTTCTTACCAACTTTGCTTCCAATGCTGTTGTTACCTTTGCATTCTCACCATTGAAGGTTTTAGATTCTTTACTTCcagttttattttcttattga 1590 0.4296 MASSSTPLINFKLSLFNSLHHQSTINNSKSPFSTCSINPCFITSSINNHLSITRVTYPLLTSHSIHNRRFNVQLQAQKEYSAGNNSESDATYQEEFSWSSVILPFVFPALGGLLFGYDIGATSGATISLQSPELSGIAWSNLTSIQLGLVVSGSLYGALFGSLLAFAIADFIGRKRQLIGAALLYLAGSAITATAPELGVLLAGRLIYGLGIGLAMHGAPLYIAETCPSQIRGTLVSLKELFIVLGILLGYFVGSFQISTVGGWRFMYGFSAPLAVLMGLGMWTLPASPRWLLLKAVQGKGSFQDLKEKAIVSLSKLRGRPPGDKESEKQIEESLVSLKSAYEDQESEANFLEVFQGPNLKAFIIGGGLVLFQQITGQPSVLYYAGPILQSAGFSAAADAAKVSVVIGLFKLVMTSVAVLKVDDLGRRPLLIGGVSGIALSLVLLSAYYKFLGGLPVVAVAALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISMAVLTNFASNAVVTFAFSPLKVLDSLLPVLFSY 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02128 529 CDD MFS_GLUT10_12_Class3_like 107 517 - -
Tsu02g02128 529 TIGRFAM SP: MFS transporter, sugar porter (SP) family 100 513 IPR003663 GO:0016020|GO:0022857|GO:0055085
Tsu02g02128 529 ProSitePatterns Sugar transport proteins signature 2. 207 232 IPR005829 GO:0016021|GO:0022857|GO:0055085
Tsu02g02128 529 ProSitePatterns Sugar transport proteins signature 1. 165 182 IPR005829 GO:0016021|GO:0022857|GO:0055085
Tsu02g02128 529 SUPERFAMILY MFS general substrate transporter 87 516 IPR036259 -
Tsu02g02128 529 PRINTS Sugar transporter signature 460 481 IPR003663 GO:0016020|GO:0022857|GO:0055085
Tsu02g02128 529 PRINTS Sugar transporter signature 483 495 IPR003663 GO:0016020|GO:0022857|GO:0055085
Tsu02g02128 529 PRINTS Sugar transporter signature 112 122 IPR003663 GO:0016020|GO:0022857|GO:0055085
Tsu02g02128 529 PRINTS Sugar transporter signature 202 221 IPR003663 GO:0016020|GO:0022857|GO:0055085
Tsu02g02128 529 PRINTS Sugar transporter signature 373 383 IPR003663 GO:0016020|GO:0022857|GO:0055085
Tsu02g02128 529 Coils Coil 328 348 - -
Tsu02g02128 529 Pfam Sugar (and other) transporter 107 514 IPR005828 GO:0016021|GO:0022857|GO:0055085
Tsu02g02128 529 Gene3D MFS general substrate transporter like domains 95 525 IPR036259 -
Tsu02g02128 529 ProSiteProfiles Major facilitator superfamily (MFS) profile. 104 529 IPR020846 GO:0022857
Tsu02g02128 529 PANTHER D-XYLOSE-PROTON SYMPORTER-LIKE 3, CHLOROPLASTIC 49 519 - -
Tsu02g02128 529 PANTHER D-XYLOSE-PROTON SYMPORTER-LIKE 2 49 519 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02128 Tsu-Chr2 20946627 20951976 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02128 27 517 Organic Solute Cotransporters AT5G59250 72.088 0.0 701
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02128 - - gmx:100809316 812.757