Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02119 ATGCAGTTCAAAATGATTGCCACTTTTCCTTCATTACATGCCCTATTTGGAGCTTTTCTCATTGCCACCATTTTCCTCAACACCTACCCTGAATTTGTTCTGGCTACTTCGCATCATGGAAGTGTTACAAGGCACTACAAATTcgatATAAGGCTGGTAAATGTTACGAGATTGTGCCACACAAAGAGTGTGGTTACCGTGAACGGAAAGTTTCCGGGTCCTCAAATTGTTGTAAGAGAAGGGGATAGATTAGTGGTTAAGGTTGTTAATCATGTTCCTAACAATATCAGCCTGCATTGgcATGGTGTGAGACAACTTGGAAGTGGTTGGTCGGATGGTCCATCATACATAACTCAATGCCCCATTCAAACAGGTCAGAGTTATGTGTACAATTTCACCATTGTTGGACAAAGAGGAACTCTCTTTTGGCATGCTCATTTCTCATGGTTAAGAGCTACTGTTTATGGACCTCTCATCCTTCTCCCAAGGCACAACGAATCTTATCCATTTCAAAAACCCTACAAAGAAGTCCCCATCCTCTTTGGTGAGTGGTGGAATGCAGATCCGGAAGCTGTTATTGCACAAGCTCTTCAGACAGGGGGTGGCCCAAATGTTTCTGATGCCTACACCATCAATGGGCTTCCTGGACCTCTTTACAATTGCTCCAAAGATACATACAAATTGAAGGTGAAACCAGGAAAGACATATCTACTACGTTTAATCAACGCTGCACTCAACGACGAACTCTTTTTCAGCATAGCTAATCACACCTTAATCATTGTTGAAGCTGATGCATCTTACATTAAACCATTCAAATCCAACACCATTCTACTTGGACCAGGACAAACCACaaatgttttattaaaaacaaaaccatattACCCAAATGCCACATTTTTCATGCTAGCAAAACCATATTTCACTGGCCAGGGTACTTTTGACAATTCCACAGTTGCTGGTATTTTAGAATACATTAaaccatataataataataataatataaatcttCCAATTCTAAAACCTTTGCTTCCATCCATCAATGATACAAATTTTGTTGCTAATTTTAGTAACAAATTTCTTAGCTTAAATAGTCCAAAATACCCTGCAAATGTGCCTAAAAATATTGACAAGAATTTTTTCTTTACCGTTGGACTAGGAACTAGTCCAtgcccaaaaaataaaaaatgtcaaggACCAAATAATAGTTCAAAATTTGCAGCTTCAATGAACAATGAATCATTTGCTTTACCTACTATAgcacttcttcaacaacattTCTTTGGAAAAGCTAATAATGGTATTTATACGACGGATTTTCCAGCTGTACCGTTAAGGCCGTTTAATTATACCGGAACTCCTCCGAATAATACATTGGTTAGTAACGGAACAAAGACGGTGGTGATACCGTTTAATACTAGAGTTCAGGTGATATTGCAGGATACAAGTATTTTGGGAGCTGAGAGTCATCCTTTGCATCTGCATGGGTTTAATTTCTTTGTTGTTGGTCAAGGTTTTGGAAATTTTAATGTTAGTAGTGATTCTCCAAAGTTTAATCTTGTTGATCCTGTTGAGAGGAACACTGTTGCTGTTCCGTCCGGTGGTTGGGTTGCGATACGATTCCTTGCTGACAATCCAGGTGTTTGGCTGATGCATTGCCACTTTGATGTTCACCTTAGTTGGGGATTGAGGATGGCTTGGATTGTTGAGGATGGAAAGTTACCTAATCAGAAATTGCCTCCTCCTCCTAAGGATCTCCCCAAGTGTTGA 1767 0.3769 MQFKMIATFPSLHALFGAFLIATIFLNTYPEFVLATSHHGSVTRHYKFDIRLVNVTRLCHTKSVVTVNGKFPGPQIVVREGDRLVVKVVNHVPNNISLHWHGVRQLGSGWSDGPSYITQCPIQTGQSYVYNFTIVGQRGTLFWHAHFSWLRATVYGPLILLPRHNESYPFQKPYKEVPILFGEWWNADPEAVIAQALQTGGGPNVSDAYTINGLPGPLYNCSKDTYKLKVKPGKTYLLRLINAALNDELFFSIANHTLIIVEADASYIKPFKSNTILLGPGQTTNVLLKTKPYYPNATFFMLAKPYFTGQGTFDNSTVAGILEYIKPYNNNNNINLPILKPLLPSINDTNFVANFSNKFLSLNSPKYPANVPKNIDKNFFFTVGLGTSPCPKNKKCQGPNNSSKFAASMNNESFALPTIALLQQHFFGKANNGIYTTDFPAVPLRPFNYTGTPPNNTLVSNGTKTVVIPFNTRVQVILQDTSILGAESHPLHLHGFNFFVVGQGFGNFNVSSDSPKFNLVDPVERNTVAVPSGGWVAIRFLADNPGVWLMHCHFDVHLSWGLRMAWIVEDGKLPNQKLPPPPKDLPKC 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02119 588 Gene3D - 29 161 IPR008972 -
Tsu02g02119 588 Pfam Multicopper oxidase 176 325 IPR001117 -
Tsu02g02119 588 ProSitePatterns Multicopper oxidases signature 2. 551 562 IPR002355 GO:0005507
Tsu02g02119 588 SUPERFAMILY Cupredoxins 170 362 IPR008972 -
Tsu02g02119 588 CDD CuRO_3_LCC_plant 434 571 IPR034289 GO:0005507
Tsu02g02119 588 SUPERFAMILY Cupredoxins 40 189 IPR008972 -
Tsu02g02119 588 CDD CuRO_2_LCC_plant 177 324 IPR034285 -
Tsu02g02119 588 CDD CuRO_1_LCC_plant 46 162 IPR034288 GO:0005507
Tsu02g02119 588 PANTHER MULTI-COPPER OXIDASE 21 588 IPR045087 -
Tsu02g02119 588 Pfam Multicopper oxidase 450 571 IPR011706 GO:0005507|GO:0016491
Tsu02g02119 588 TIGRFAM laccase: laccase 43 588 IPR017761 GO:0046274|GO:0048046|GO:0052716
Tsu02g02119 588 ProSitePatterns Multicopper oxidases signature 1. 546 566 IPR033138 -
Tsu02g02119 588 Gene3D - 392 588 IPR008972 -
Tsu02g02119 588 PANTHER LACCASE 21 588 - -
Tsu02g02119 588 Pfam Multicopper oxidase 53 163 IPR011707 GO:0005507
Tsu02g02119 588 Gene3D - 174 364 IPR008972 -
Tsu02g02119 588 SUPERFAMILY Cupredoxins 368 588 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02119 Tsu-Chr2 20813787 20817852 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02119 K05909 - gmx:100811833 1001.12