Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02111 atgggTACCCCCCAAAAGGAGAATGAAGGCAAGGGTTTCTTTTCCGCAATGTCTTCCCGCTTCAGCAACGCTATCCGATCTGTTAACGGGCTTCTTGGATATGAAGGTGTTGAAGTCATAAACCCAGATGGTGGTAAAGATGATGTAGATGATGAACTTCAGAGAGGAAGATGGAAACCGGAGGAAAGAGATGGTTACTGGAAGATGATGCAGAATTATATCGGGGCAGATGTAACATCACTGGTGACACTGCCGGTTATTATATTTGAACCAATGACTATGCTCCAAAAAATGGCCGAGTTGATGGAGTACTCCCACTTGTTAGATCAAGCAGATGAATCAGAGGATCCTTACATGCAGTTGGTGTATGCATCATCATGGGCTATATCTGTGTACTTTGCATACCAACGAACCTGGAAGCCTTTTAATCCTATCCTTGGAGAGACTTATGAATTGACCAACCATAATGGAATTACATTTCTTGCAGAACAGGTTAGTCATCATCCCCCAATGAGTGCTGGGCATGCTGAGAATGAACATTTTACATATGACGTGACTTCCAAGTTAAAAACTAAGTTTTTGGGGAATTCTGTTGATGTGTACCCTGTTGGAAGAACACGCGTGACCCTTAAGAAGCACGGTGTAGTCTTAGATTTGGTGCCACCTCCTACAAAGGTTAATAACCTGATTTTTGGCCGGACTTGGATTGATTCACCTGGGGAAATGATAATGACAAATTTGACAACTGGAGACAAAGCCGTACTTTACTTTCAACAATGTGGATGGTTTGGTGCTGGTCGCTATGAAGTGGATGGTTATGTTTATAATTCTTCTGAAGAGCCCAAAATTTTGATGACTGGGAAGTGGAATCAGTCAATGAATTATCAACCTTGTGATTCAGAAGGAGAGCCTCTTCCAAACACAGAATTGAAAGAGGTTTGGCATGTTGCTGATGTTCCACCAAATGATAAATTCCAGTATACACATTTTGCTCATAAATTAAACAGCTTTGACACTGCCCCCAGAAAGTTGTTGGCATCAGACTCGCGTCTACGTCCAGATAGATATGCACTTGAGTTGGGTGATCTGTCAAAATCCGGGACAGAAAAGAGCAGtTTGGAGGAGAGGCAGCGTGCTGAAAAGAGAGCTCGGGAAGAAAAGGGGCATAAATTCACACCAAGATGGTTTGAGTTGACGGAAGAAGTGACAGCGACTCCTTGGGGTGATTTGGAAATCTACCAATATAATGGTAAATACACGGAACATCGGGCTGCTGCAGATAACTCTGGCAgtattgatgatgttgatgttaAATCAATTGAATTCAATCCATGGCAGTTTGCTGACTTGGCCACGGAATGA 1362 0.4207 MGTPQKENEGKGFFSAMSSRFSNAIRSVNGLLGYEGVEVINPDGGKDDVDDELQRGRWKPEERDGYWKMMQNYIGADVTSLVTLPVIIFEPMTMLQKMAELMEYSHLLDQADESEDPYMQLVYASSWAISVYFAYQRTWKPFNPILGETYELTNHNGITFLAEQVSHHPPMSAGHAENEHFTYDVTSKLKTKFLGNSVDVYPVGRTRVTLKKHGVVLDLVPPPTKVNNLIFGRTWIDSPGEMIMTNLTTGDKAVLYFQQCGWFGAGRYEVDGYVYNSSEEPKILMTGKWNQSMNYQPCDSEGEPLPNTELKEVWHVADVPPNDKFQYTHFAHKLNSFDTAPRKLLASDSRLRPDRYALELGDLSKSGTEKSSLEERQRAEKRAREEKGHKFTPRWFELTEEVTATPWGDLEIYQYNGKYTEHRAAADNSGSIDDVDVKSIEFNPWQFADLATE 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02111 453 Gene3D - 147 324 - -
Tsu02g02111 453 Gene3D - 355 447 - -
Tsu02g02111 453 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 4 449 IPR000648 GO:0008289
Tsu02g02111 453 MobiDBLite consensus disorder prediction 368 386 - -
Tsu02g02111 453 SUPERFAMILY Oxysterol-binding protein-like 59 433 IPR037239 -
Tsu02g02111 453 Pfam Oxysterol-binding protein 66 423 IPR000648 GO:0008289
Tsu02g02111 453 ProSitePatterns Oxysterol-binding protein family signature. 163 174 IPR018494 -
Tsu02g02111 453 MobiDBLite consensus disorder prediction 366 386 - -
Tsu02g02111 453 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED PROTEIN 3B 4 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02111 Tsu-Chr2 20727422 20733447 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02111 - - gmx:100810228 836.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g02111 02 20727422 20733447 Tsu02g02111 02 20727422 20733447 ECH