Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02072 ATggcttcttcttcctcctcctcttccCCTCTcataattttctctttcatcTTCCTCACCATCTTCTCACCCTCACAAGCTCTCATCTTCACCTTCGTCAACAACTGCCCATACACAGTCTGGCCTGCTATCCTACCCAACGAAGGCTTCCCTGTTCTCAACACAAGCGGCTTTGAACTCCGCCATTTCACCCACCTATCCATCCCTGTCCCAGACACTCACTGGGCCGGACGTGCTTGGGCCAGAACCGGCTGTACCACCAACAACAACCAATTCACCTGCCTCACCGGCGACTGCGGTAACCGTCTCCAATGCAACCGTCAAGGCGGTTTAGCCCCAGCAACACTAGTCCAATTCGATGTACATCACGGTAACAACGATTTCTCATCTTACAGCGTTAGTCTCGTCGACGGTTTCAACGCTCCGATGACGGTTACACCTCACGAAGGTAAAGGTGAGTGTCCGGTTGTCGGTTGCCGTGCTGATCTTGTTGCCACGTGTCCTCCTGTTTTACAGCACCGTGTTCCGGCGGTTCATGGTCCTGTTGTGGCTTGTAAGAGTGGTTGTGAAGCTTTTCACACGGATGAACTTTGTTGTAGGAATCACTTTAATAACCCTCAAGCGTGTAAACCTTCTGTGTATTCCACGCACTTTAAACACGCGTGTCCTGCTACTTTTACCTACGCGCATGATACTCCTTCTTTGACTCATCAGTGTTCTTCACCTCATGAGCTTAAGGTTATCTTTTGCCATTGA 756 0.4749 MASSSSSSSPLIIFSFIFLTIFSPSQALIFTFVNNCPYTVWPAILPNEGFPVLNTSGFELRHFTHLSIPVPDTHWAGRAWARTGCTTNNNQFTCLTGDCGNRLQCNRQGGLAPATLVQFDVHHGNNDFSSYSVSLVDGFNAPMTVTPHEGKGECPVVGCRADLVATCPPVLQHRVPAVHGPVVACKSGCEAFHTDELCCRNHFNNPQACKPSVYSTHFKHACPATFTYAHDTPSLTHQCSSPHELKVIFCH 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02072 251 PRINTS Pathogenesis-related protein signature 241 250 IPR001938 -
Tsu02g02072 251 PRINTS Pathogenesis-related protein signature 78 89 IPR001938 -
Tsu02g02072 251 PRINTS Pathogenesis-related protein signature 29 41 IPR001938 -
Tsu02g02072 251 PRINTS Pathogenesis-related protein signature 129 145 IPR001938 -
Tsu02g02072 251 ProSiteProfiles Thaumatin family profile. 27 251 IPR001938 -
Tsu02g02072 251 SUPERFAMILY Osmotin, thaumatin-like protein 29 250 IPR037176 -
Tsu02g02072 251 Gene3D Thaumatin 29 250 IPR037176 -
Tsu02g02072 251 Pfam Thaumatin family 34 250 IPR001938 -
Tsu02g02072 251 PIRSF PR5 1 251 IPR001938 -
Tsu02g02072 251 CDD TLP-PA 29 250 - -
Tsu02g02072 251 PANTHER PATHOGENESIS-RELATED THAUMATIN SUPERFAMILY PROTEIN 16 251 - -
Tsu02g02072 251 SMART tha2 30 251 IPR001938 -
Tsu02g02072 251 PANTHER OS03G0233200 PROTEIN 16 251 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02072 Tsu-Chr2 20187960 20189085 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02072 14 250 Receptor kinase-like Gene Family AT5G38280 36.585 1.12e-44 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02072 - - cam:101503313 446.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g02072 02 20187960 20189085 Tsu02g02072 02 20187960 20189085 ECH