Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02062 ATGGCGCCAAAGGGAGAGAAGAAACCAGCGGAGAAGAAACCCGCAGAAGAGAAGAAGTCCACCGTAGCAGAGAAGGTTCCCGCTGAGAAGAAGCCAAAGGCCGGAAAGAAGCTGCCAAAGGAAGGTGGTTCAGCCGCTGCcggagagaagaagaagaagagaaacaaGAAGAGCGTTGAAACATACAAGATCTACATCTTCAAAGTTCTGAAACAAGTTCACCCTGACATTGGTATCTCAAGCAAAGCCATGGGAATAATGAACAGTTTCATCAATGATATCTTCGAGAAGCTCGCTCAAGAATCATCAAGACTTGCAAGGTACAACAAGAAGCCAACAATAACTTCTAGGGAAATTCAAACTGCAGTTAGACTTGTTCTTCCTGGTGAATTGGCTAAGCATGCTGTTTCTGAGGGTACCAAAGCTGTGACCAAGTTCACAAGTTCTTAG 450 0.4267 MAPKGEKKPAEKKPAEEKKSTVAEKVPAEKKPKAGKKLPKEGGSAAAGEKKKKRNKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02062 149 Gene3D Histone, subunit A 23 149 IPR009072 GO:0046982
Tsu02g02062 149 PRINTS Histone H2B signature 103 120 IPR000558 GO:0000786|GO:0003677|GO:0030527
Tsu02g02062 149 PRINTS Histone H2B signature 62 80 IPR000558 GO:0000786|GO:0003677|GO:0030527
Tsu02g02062 149 PRINTS Histone H2B signature 120 133 IPR000558 GO:0000786|GO:0003677|GO:0030527
Tsu02g02062 149 PRINTS Histone H2B signature 133 146 IPR000558 GO:0000786|GO:0003677|GO:0030527
Tsu02g02062 149 PRINTS Histone H2B signature 81 101 IPR000558 GO:0000786|GO:0003677|GO:0030527
Tsu02g02062 149 MobiDBLite consensus disorder prediction 1 57 - -
Tsu02g02062 149 Pfam Core histone H2A/H2B/H3/H4 1 125 IPR007125 GO:0003677
Tsu02g02062 149 SMART h2b3 52 148 IPR000558 GO:0000786|GO:0003677|GO:0030527
Tsu02g02062 149 SUPERFAMILY Histone-fold 34 149 IPR009072 GO:0046982
Tsu02g02062 149 ProSitePatterns Histone H2B signature. 117 139 IPR000558 GO:0000786|GO:0003677|GO:0030527
Tsu02g02062 149 PANTHER HISTONE H2B 5 149 IPR000558 GO:0000786|GO:0003677|GO:0030527
Tsu02g02062 149 PANTHER HISTONE H2B.1-RELATED 5 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02062 Tsu-Chr2 20074681 20075130 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02062 K11252 - gmx:100778668 224.557