Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02050 ATGTCTTCGAGTTTCAGAGGAAGAACAGCCACCTCCAGAGATATCAGTCCAGAGAGAACCAAAGTTTGGACTGAACCTAAACCCAAAACTCCCAGAAAAGTTTCCGTCGTTTACTATCTCTCCCGTAACGGCCACCTCGAACACCCTCATTTCATGGAAGTCCCTCTCTCCGATCCTCACGGCCTCTACCTCAAAGATGTAATCATTCGCTTGAACCTTCTCCGTGGGAAAGCTATGGCTACTATGTACTCATGGTCCTCTAAACGGAGTTACAAAAACGGTTTCGTTTGGCATGATTTATCTGAGAATGATTTCATCTACCCAACGCAAGGGCAAGATTACGTTCTCAAAGGATCTGAGATTCTCGATCATGTAACCACCGTTCAAACGCCGCAGGAAGAAGAATCTGATTCTCCGGTGGTGATAACAAGGCGGCGTAACCAGTCGTGGAGTTCTATTGACTTAAACGAGTACCGAGTTTATAAGTCTGAGTCGTTAGGTGACTCGGTTGGAAATGTCGCTGCTGACGCGTCGACTCAGACGGAGGATAAACGGAGACGGAGGAGAGTtgtgaaggaagaagaagagaaagagaagaatgaaattgaaaacgATGAAATTCAGAGTACGGAATTGAGTAGGGAAGAGATCTCGCCTCCACCGTCGGATTCAAGTCCAGAAACATTGGGAACATTGATGAAAGTAGATGGACGGTTGGGATTAAGATCTTCGGTTCCTGTGAAGGAGAATCCAACGGTTGAGAGTTGTCCAAGTGGAAGGATGAGAGCTTCATCGGTACTCTTGCAATTGTTATCGTGCGGTGCGGTGTCTTTCAAGGAGAGTAGTGGAAGTGGGGCTAGTTCAGGTGAAGATCAACGGTTTTCGTTGGTTGGGCACTATAAGTCTAGGTTGCCTCGCGGAGCAGGGAATCATGTGGGAAAAGAAGTGGGGACATTGGTGGAAATTCCTGATTTGAATAGGGTGAGATTGGAAGATAAAGAGTACTTTAGTGGAAGCTTGATTGAAACCAAAAAAGTTGAAGCTCCTGCATTCAAAAGGTCCTCTTCGTACAATGCAGATAGCGGTTCCCGGTTGCAAATCATGGAACATGAAGGCGATATGGTGCGGGCAAAATGCATACCAAGGAAGTCCAAGACACTATCAACAAAGAAAGAAGAGGGTACTTCCGGTTCCATCGATAATGTTAGCCGTAGTCAACATGGAAGCAAAAGATTTGAGGGACAATAA 1248 0.4455 MSSSFRGRTATSRDISPERTKVWTEPKPKTPRKVSVVYYLSRNGHLEHPHFMEVPLSDPHGLYLKDVIIRLNLLRGKAMATMYSWSSKRSYKNGFVWHDLSENDFIYPTQGQDYVLKGSEILDHVTTVQTPQEEESDSPVVITRRRNQSWSSIDLNEYRVYKSESLGDSVGNVAADASTQTEDKRRRRRVVKEEEEKEKNEIENDEIQSTELSREEISPPPSDSSPETLGTLMKVDGRLGLRSSVPVKENPTVESCPSGRMRASSVLLQLLSCGAVSFKESSGSGASSGEDQRFSLVGHYKSRLPRGAGNHVGKEVGTLVEIPDLNRVRLEDKEYFSGSLIETKKVEAPAFKRSSSYNADSGSRLQIMEHEGDMVRAKCIPRKSKTLSTKKEEGTSGSIDNVSRSQHGSKRFEGQ 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02050 415 MobiDBLite consensus disorder prediction 12 27 - -
Tsu02g02050 415 Pfam Protein SOSEKI, plant 130 361 IPR010369 -
Tsu02g02050 415 Pfam Protein SOSEKI, plant 34 127 IPR010369 -
Tsu02g02050 415 MobiDBLite consensus disorder prediction 213 229 - -
Tsu02g02050 415 PANTHER UPSTREAM OF FLC PROTEIN (DUF966) 9 384 IPR010369 -
Tsu02g02050 415 MobiDBLite consensus disorder prediction 391 405 - -
Tsu02g02050 415 MobiDBLite consensus disorder prediction 172 230 - -
Tsu02g02050 415 PANTHER OS01G0839200 PROTEIN 9 384 - -
Tsu02g02050 415 MobiDBLite consensus disorder prediction 379 415 - -
Tsu02g02050 415 Coils Coil 188 215 - -
Tsu02g02050 415 MobiDBLite consensus disorder prediction 1 27 - -
Tsu02g02050 415 MobiDBLite consensus disorder prediction 179 212 - -
Tsu02g02050 415 PIRSF UCP031043 1 405 IPR021182 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02050 Tsu-Chr2 20007972 20012268 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02050 - - gmx:100779732 574.318
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g02050 02 20007972 20012268 Tsu02g02050 02 20007972 20012268 ECH