Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01720 ATGGAAGACTACAATTTTGTTGTTGGTCAAGTATTCCCTGATGTGAAGGCATTTCGTAATGCTATTAAAGAAGCTGCTATTGCACAGCATTTTGAGCTTCGTATTATTAAAAGTGACTTGATTCGATACTTTGCTAAGTGTGCCTCCGATGGCTGTCCATGGCGGATTCGTGCTGTCAAGCTCCCAAATGCCTCGACATTTATCATAAGAAGTCTTGAAGGGACACATACTTGTGGGAGAAATGCACTCAATGGACACCATCAGGCTTCTGTTGATTGGATAGTGAGTTTTATAGAAGAAAGGTTACGGGATAACATCAATTATAAACCAAAAGATATTTTACATGACATCCATAAGCAATATGGTATAACTATACCATACAAGCAAGCTTGGCGTGCAAAGGAACGGGGCCTTGCAGCAATATATGGCTCTTCTGAAGAAGGATTTTACCTACTTCCTTCATACTGtgaagaaataaagaaaacaaatccTGGAAGTGTTGCAGAGGTGTTTACCACTGGTGCAGACAACCGTTTTCAGAGActttttgtttccttttatgCATCAATTCATGGTTTTGTTAATGGTTGTTTTCCCATTGTTTCTCTTGGTGGAATCCAGATGAAAAGCAAATACCTTAGCACATTCCTTTCAGCAACTTCTTTTGATGCTGATGGTGGGTTGTTTCCACTTGCTTTTGCTGTTGTCGATGTAGAAAATGATGAAAGCTGGACATGGTTCCTGTCTGAGTTGTATAAGGCACTAGAGGTGAATATTGAGTGCATGccacaaattatatttttatcagaTGGGCAAAAGGGTATTGTGGATGCAATAAGAAGGAAGTTCCCAAAATCTTCCCATGCATTCTGCATGCGCCACTTAAGTGAATGCATTAGCAAAGAATTCAAGAACTCTAGGCTTATCCATCTTCTATGGAAGGCTGCATATGCTACTACAACTACTGCATTCAAAGAAAAAATGGCTGAAATAGAAGAAGCCTCTCCCGAAGCCGCCAAATGGTTACAGCAATTTCATCCTTCCCAGTGGGCCCTAGTATATTTTGAAGGGACAAGATATGGTCATTTATCTTCTAATATCGAGGAGTTTAATAAATGGATTCTTGATGCTCGGGAGTTGCCAATTATCCAGGTAATTGAACGGATTCATGGCAATCTTGTAACTGTGTTTGACGACAGGCGTTTGAAAAGCAATTCATGGTGTTCTGTGCTTGTTCCATCTGCTGAGAGGCGAATGGTTGAAGCCATTAATCATGCATCCACATATCAAGTGCTTAGATCGGATGAGGTAGAGTTCGAGGTTATTTCAGCTGATCGATCCGATATTGTAAATATTGGCAGCCATAGCTGCTCCTGTCGTGATTGGCAGCTATATGGGATACCGTGTTCCCATGCCGTTGCTGCTCTTATCTCATGCCGTAAGGATGTCTATGCATATACTGCAAAGTATTTTACTGTTGCAAGTTACAGAGATACCTATGCAGAGGAGCTACACCCCGTCCCCAAAAAACTTGAGTGGAGGAGAACAGATGAATCTGGTTTGGATAATGATATCGCAGTTGTGCGGCCGCCAAAATTTCGCCGACCTCCAGGGCGTCCGGAAAATAAACGAATTTGTGTGGAGGACCATAATCGCGACAAACATACAGTGCATTGTAGTCGCTGTAATCAAACTGGACATTACAAGACAACATGCAAAGCAGAAATGATTAATAGTATAGAACAGTTTTAG 1752 0.4018 MEDYNFVVGQVFPDVKAFRNAIKEAAIAQHFELRIIKSDLIRYFAKCASDGCPWRIRAVKLPNASTFIIRSLEGTHTCGRNALNGHHQASVDWIVSFIEERLRDNINYKPKDILHDIHKQYGITIPYKQAWRAKERGLAAIYGSSEEGFYLLPSYCEEIKKTNPGSVAEVFTTGADNRFQRLFVSFYASIHGFVNGCFPIVSLGGIQMKSKYLSTFLSATSFDADGGLFPLAFAVVDVENDESWTWFLSELYKALEVNIECMPQIIFLSDGQKGIVDAIRRKFPKSSHAFCMRHLSECISKEFKNSRLIHLLWKAAYATTTTAFKEKMAEIEEASPEAAKWLQQFHPSQWALVYFEGTRYGHLSSNIEEFNKWILDARELPIIQVIERIHGNLVTVFDDRRLKSNSWCSVLVPSAERRMVEAINHASTYQVLRSDEVEFEVISADRSDIVNIGSHSCSCRDWQLYGIPCSHAVAALISCRKDVYAYTAKYFTVASYRDTYAEELHPVPKKLEWRRTDESGLDNDIAVVRPPKFRRPPGRPENKRICVEDHNRDKHTVHCSRCNQTGHYKTTCKAEMINSIEQF 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01720 583 PANTHER POLYPROTEIN, PUTATIVE-RELATED 1 574 - -
Tsu02g01720 583 Pfam MuDR family transposase 5 69 IPR004332 -
Tsu02g01720 583 Pfam SWIM zinc finger 446 479 IPR007527 GO:0008270
Tsu02g01720 583 ProSiteProfiles Zinc finger SWIM-type profile. 439 480 IPR007527 GO:0008270
Tsu02g01720 583 Pfam MULE transposase domain 209 296 IPR018289 -
Tsu02g01720 583 SMART 26again6 455 482 IPR006564 GO:0008270
Tsu02g01720 583 PANTHER OS01G0334000 PROTEIN 1 574 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01720 Tsu-Chr2 15136712 15140377 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01720 - - gmx:100800865 1031.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g01720 02 15136712 15140377 Tsu02g01720 02 15136712 15140377 ECH