Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01379 ATGGATTATGAAAGGATTCAAAAGCCTCAGGGTGGTGGTGGATTTTCACCTGGAAAGTTGAGGAGTATGCTATTGGGTGTGGAGAAGAAGAGGAAACAAGAGGAAGAGCTTGATTCTAATTTCACTCCGAGATCTCAAAGTTCAGACATGGATGAATCTGGCGGTAGCAGTTCTGATCATTGTAAATATGTAGATGTTGTGAGTGTCCATCCTGAATATTCAGCTTCTACAGATCGAACCTGTAGCATAGAGGCAGATAGTAATGATCGGTTGGCAAAGGGTAATGCAGCTGTGGCTGCACGGAATAGAATCCTGGAAGACCCTTCTTTAGATTATGATAGCGGGTATGATAATATGATCATGTCCCCATCAatgtttgaatttcaaaaagCTGAGCGTGCCCCACCAAGAGTACCTGTGGGGCCTTTCTCAAAACCAGCACCATCTAAATGGGACGATGCGCAGAAGTGGATAGCAAGTCCGACATCAAACAGGCCAAAGACTGCACAGAGCCAGGGGCAAAGCGGGCATGCAGTACCACGGAAGGTTGGTGGTCTTGGAAGCCGGCAACCTTCAATGAAGGTTGTCGTTGAAGTTCCAGATCCAAAAGAAATTGCTTTAGATGAACCGGATACTAAACAAATTGATGCAAATCAAACAAAGATGGAAGGTGGACAGAAGTTTGTGAATTGGGATGATGACCCCTATGCAATTGCAAAAGATTATGGGGTTAGTCTCAGCCAGCATAATTCATCTACTGCTACCCAGAGTGCAACAACATTTGTTCCTCCCCCTTCAACAGCTCGATCTGTATCGATGAGAGATATGGGAACAGAAATGACACCTATTGCTAGCCAAGAGCCATCAAGAACAGGTACACCAGTGGGGGCAACAACACCAATGCGCAGCCCTAATTCTTCCCGGCCTTCTACTCCCACTAGAGCCGCCCCTTCATCAACTTTAATCGATCCACGTAATGACAATCTGAATCTTAACAAGAACGAGTTGTCTGAAAAGGAGCTTCAAATGAAAACCAGGCGAGAAATAATGGTCCTAGGGACACAACTAGGTAAAATGAACATTGCCGCCTGGGCTAGCAAAGAAGAAGAGGACAAGGATGCATCCACTTCactgaaaataaaaacaagtgaACAACCAGCGAAGAGTGTCGTTGAAGCACGTGCAACAGCATGGGAGGAGGCTGAGAAGGCCAAATATATGGCCAGATTTAGGCGCGAGGAGATGAAAATCCAGGCATGGGAAAATCATCAGAAAGCAATAACGGAAGCCAAGATGAGAAAAGTCGAGGTAGAGGTTGAAAGAATACGGAGTAAGTCGCATGACAAGCTGATGAACAAATTAGCAGCTGCAAGGCACAAGGCTGAGGAAAAGCGAGCAGCAGCAGAAGCCAATAAAAATCATCAAGCTACTAAAACTGAAGAACAAGCAGAATATATCAGAAGAACTGGTCATGTACcttcttcatatttttcattttcttgctGCACTTGGTGCTCTTAA 1521 0.4359 MDYERIQKPQGGGGFSPGKLRSMLLGVEKKRKQEEELDSNFTPRSQSSDMDESGGSSSDHCKYVDVVSVHPEYSASTDRTCSIEADSNDRLAKGNAAVAARNRILEDPSLDYDSGYDNMIMSPSMFEFQKAERAPPRVPVGPFSKPAPSKWDDAQKWIASPTSNRPKTAQSQGQSGHAVPRKVGGLGSRQPSMKVVVEVPDPKEIALDEPDTKQIDANQTKMEGGQKFVNWDDDPYAIAKDYGVSLSQHNSSTATQSATTFVPPPSTARSVSMRDMGTEMTPIASQEPSRTGTPVGATTPMRSPNSSRPSTPTRAAPSSTLIDPRNDNLNLNKNELSEKELQMKTRREIMVLGTQLGKMNIAAWASKEEEDKDASTSLKIKTSEQPAKSVVEARATAWEEAEKAKYMARFRREEMKIQAWENHQKAITEAKMRKVEVEVERIRSKSHDKLMNKLAAARHKAEEKRAAAEANKNHQATKTEEQAEYIRRTGHVPSSYFSFSCCTWCS 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01379 506 Coils Coil 425 445 - -
Tsu02g01379 506 MobiDBLite consensus disorder prediction 201 216 - -
Tsu02g01379 506 MobiDBLite consensus disorder prediction 24 39 - -
Tsu02g01379 506 MobiDBLite consensus disorder prediction 160 177 - -
Tsu02g01379 506 MobiDBLite consensus disorder prediction 1 62 - -
Tsu02g01379 506 MobiDBLite consensus disorder prediction 160 228 - -
Tsu02g01379 506 Pfam Remorin, C-terminal region 391 494 IPR005516 -
Tsu02g01379 506 PANTHER OS02G0116800 PROTEIN 13 501 - -
Tsu02g01379 506 Coils Coil 447 480 - -
Tsu02g01379 506 MobiDBLite consensus disorder prediction 282 331 - -
Tsu02g01379 506 MobiDBLite consensus disorder prediction 40 54 - -
Tsu02g01379 506 PANTHER OS02G0116800 PROTEIN 13 501 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01379 Tsu-Chr2 11956652 11961180 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01379 - - gmx:100787310 791.186
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g01379 02 11956652 11961180 Tsu02g01379 02 11956652 11961180 ECH