Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01231 ATGGCTCCGAAGCCGAAACCCACGCCGTCGCAGCCTCCAGCTCCACCACCACTCGAAGATCTCTTCACCACACTCAACAAGCACATTCAAGCTTCCTCATTCACTAATGCCGTTAAACTCACAGATCAGATTCTATCAATTGCACCTGGCGATGAAGACGCTCTCCGATGCAAGATCGTCGCCCTAATCAAAGATGATCGATTCGATGATGCTATTTCCGCTATTCAATCTTCTCGGACCCCTCCTGAGGATTTTCATTTCCTTAAGGCATACTGCTTATACAAACAAAACAAGTTGGATGAAGCCTTGGAGTCTTTGCAAAAACATGAGACAAATGATGAAACAATGCTTTTGGAATCTCAAATTTTGTATCGTCTTGGAAAAATGGATGCTTGTTTAGATATCTACCAGAAGCTTCAAAAGTCCAAGATTGATATGTTGGAAATAAATTCTGTTGCTGCCTTAGTTATGGCAGGGAGATCATCTGAAGTTCAAGGATGGCTGGATTCATTTCGGGTTAAAGCAACAAGCAGCTTTGAATTGGCATACAATACTGCTTGTTCTTTAATTCAAAGAAATAAGTACACAGATGCTGAACAACTCTTGCTGTCTGGCCGAAGaaTTGGTCAAGAGAGCCTGATGGAAGATAATTGGCCTGATGAAGATATAGAAAATGAATTGTCTCCTATTGCTGTACAATTGGGCTATGTCCAACAGCTACTTGGGCGTAAACAAGATGCTATTGAAGCTTACGTGGACATGATTAAACGAGATATGGCCGATGAATCATCCATTGCAGTGGCAATCAATAATCTTGTTTCACTGAAAGGTCCAAAAGATGTTTCTGATAGCCTGAAGAAACTTGATCGGCTAAAAGAGAAAGAGATACAAAGCTTTCGCCTAGCTCATGGATTGGACTTGAAACTTTCAGCAAAAGAAAAGGAAGCAATATATGCAAATAGGGTTCTTTTGCTTCTTCATGCTAACAAGATCGACCAGGCCCGAGAACTTGTTTCTGCATTGCCTGATATGTTTCCTGAAAGTATTGTTCCAGTATTGCTGCAAGCTGCCCTCTTGGTTAGAGAGAACAAAGCTGGAAGGGCTGAGGAAATACTGGCACAGTTTGCTGGGAAGTTCCCTGAGAAGTCCCAGGTTCTTTATTTAGCCAGGGCTCAGGTTGCGGCGGCGGCTGGCCACCCACATATTGCAGCCGATTCTCTCACTAAGATACCGGATATTCAACACATGCCAGCTACTGTTGCCACCCTTGTGTGTTTAAAAGAGCGAGCCAACGACGTTGAAGGTGCAGCTGTTGTGCTTGATTCAGCAACCAAATGGTGGTCTAATGTTATGACCGAGGACAATAAGCTTAATATTATAACACAAGAGGCTGCTTCATTCAAGCTAAGGCATGGAAGGGAAGAGGATGCTGCTAAACTTTACGAGGAGCTGGTTAAAAGTCAGGGAAGCATAGAAGCACTAGTTTGGCTGATAACAACAGTTGCGCGTCTTGATGTTGTTAAGGCAGAGCTATACGAAAAGCAACTAAAGACCTTACCTGGACTGAAGGGAATTGATGTAGACAGCTTGGAGCGTACTTCTGGAGTTAAACGAGTTGAGGGTCCTCCACATGCGGGTATCGCTGAAATGAACGAGGAAGCAAAGAATAAGACAAAAActaagaaaaagagaaagagaaagccAAGGTATCCTAAAGGGTTTAACCCAGCAAACCCAGGTCCTCCACCAGATCCCGAAAGGTGGCTTCCCAAGCGAGAGAGATCAACTTTTAGGCCAAAGAGGAAGGACAAAAGAGCTGCTCAAGTGAGAGGCTCACAGGGTGCTGTAGTTAGAGACAAGCACGAGGCTGGTGCTTCATCCAATcaatcaaatccaaaatcaaaccaaGCATCTACCTCCAAAGGTGCTACCCAGAGTGCGGTTTCTGAGCAAACCAAACCTTCATCCAAGTCAAGAAAGAAGTCTAGGAAGTAG 1995 0.4311 MAPKPKPTPSQPPAPPPLEDLFTTLNKHIQASSFTNAVKLTDQILSIAPGDEDALRCKIVALIKDDRFDDAISAIQSSRTPPEDFHFLKAYCLYKQNKLDEALESLQKHETNDETMLLESQILYRLGKMDACLDIYQKLQKSKIDMLEINSVAALVMAGRSSEVQGWLDSFRVKATSSFELAYNTACSLIQRNKYTDAEQLLLSGRRIGQESLMEDNWPDEDIENELSPIAVQLGYVQQLLGRKQDAIEAYVDMIKRDMADESSIAVAINNLVSLKGPKDVSDSLKKLDRLKEKEIQSFRLAHGLDLKLSAKEKEAIYANRVLLLLHANKIDQARELVSALPDMFPESIVPVLLQAALLVRENKAGRAEEILAQFAGKFPEKSQVLYLARAQVAAAAGHPHIAADSLTKIPDIQHMPATVATLVCLKERANDVEGAAVVLDSATKWWSNVMTEDNKLNIITQEAASFKLRHGREEDAAKLYEELVKSQGSIEALVWLITTVARLDVVKAELYEKQLKTLPGLKGIDVDSLERTSGVKRVEGPPHAGIAEMNEEAKNKTKTKKKRKRKPRYPKGFNPANPGPPPDPERWLPKRERSTFRPKRKDKRAAQVRGSQGAVVRDKHEAGASSNQSNPKSNQASTSKGATQSAVSEQTKPSSKSRKKSRK 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01231 664 Pfam Putative TPR-like repeat 55 153 IPR031545 -
Tsu02g01231 664 Pfam SRP72 RNA-binding domain 551 599 IPR013699 GO:0006614|GO:0008312|GO:0048500
Tsu02g01231 664 Gene3D Tetratricopeptide repeat domain 18 165 IPR011990 GO:0005515
Tsu02g01231 664 SUPERFAMILY TPR-like 19 202 IPR011990 GO:0005515
Tsu02g01231 664 PIRSF SRP72 10 664 IPR026270 GO:0006614
Tsu02g01231 664 Gene3D Tetratricopeptide repeat domain 181 515 IPR011990 GO:0005515
Tsu02g01231 664 PANTHER SIGNAL RECOGNITION PARTICLE 72 11 662 IPR026270 GO:0006614
Tsu02g01231 664 Coils Coil 547 567 - -
Tsu02g01231 664 MobiDBLite consensus disorder prediction 623 653 - -
Tsu02g01231 664 MobiDBLite consensus disorder prediction 534 664 - -
Tsu02g01231 664 SUPERFAMILY TPR-like 233 486 IPR011990 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01231 K03108 - gmx:100810125 1011.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g01231 02 10456425 10460646 Tsu02g01231 02 10456425 10460646 ECH