Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01226 ATGGCACCTTCTTACTTTCCTCTTCGTTGGGAAAGTACAGGAGATCAATGGTGGTATGCAACACCTATTGATTTAGCAGCTGCAAATGGTCTTTATGATTTAGTAACTGAGCTTCTTCATTTTGATACAAATAATCTCATTAAGCTAACTTCACTTCGTAGAATTCGTCGACTCGAAACAGTTTGGGATGATGATGAGTCTCAGTTTCAAGATGTTGCTAAGTGTAGGTCTTATGTTGCAAGGAAGCTTTTGATTGAGTGTGAAGAAACAGGAACAGGAAAAAATTCTCTTATTAATGGTGGATATGGTGGTTGGCTTTTGTATACTGCTGCTTCTGCTGGTGATTTAGAGTTTGTTCATGAATTGTTGAGAAGAGATTCTTTGTTGGTTTTTGGTGAAGGAGAATATGGTGTTACTGATATGCTTTATGCTGCAGCTAGGAGTAAGAATTCTGAGGTTTTTAATATGATTCTTGATTTTGCACTGTTGGGAAGAGAGTTTAGTATTGTTGAATTGGATGAAAGTGGTGCTGATGGTGGTGGAGTTTTCATGAGGGAGATTTTGAATAGGGCTATTCATGCTGCTGCTAGAGGAGGAAATTGGGAAATATTGAAAAAGCAGCTTATTCTAGGAAGTGCTTCTAAGATTTTATTATCTTATAGAGATGCTCAAGGATGTACTGTTTTGCATTCAGCAGCTGGAAGAGGCCAGGTTGAGGTGGTTAGAAATCTAATTCTATTATCACCTGATATTATAAACTCTACTGATTATCAAGGCAATACAGCATTACATGTAGCTTGTTGCAGAGGTTATCTTTCTGTGGTAGAGATTCTGATTCAAGCATCTCCCTCATTAACAATGTTAACCAATAAAAATGGAGACACTTTTCTTCATATGGCAGTGTATGGTTTCACAAGTCCTGATTTCTGCAAACTAGACAAACACAATGAACTCATGAATCAGTTACTACTAACCGAAAAGATTGCGAACTTGAAGGACATAATCAATGTCAAGAACAATGTTGGAAGAACAGCAATTCATTTAGCTGTTATTCATGATGTCCAATGTGATGTGGTGGAATCAATGATGTCTGTTAAATCGATTGATCTTAACATTCGCGATGCGGATGGAATGACACCTTTTGATTATTTGAAACAAAGACCGAGATCAAGAACTTCTAAATTATTAATCAAGCAATTTATTTCAGCTGGAAGTTTCATTAATCGTGAAGATTATATGACAAGAAACGCAATTGTGACTCATTTGAAAACTCATCATGGTATTCGAGGTAGTCCCGGAACTTTATTTAGAATTCCGGATTCTAAGATATTCTTGTACTCATGTACTGATAATGATCAAGCAAGTGTAGAATCAAATTCATGCTCAATTGAAGTAGAGAGTAATTATGACTCAGCTGAAAATTCCTCGATTAACAGCAAGACTAGTTCTGTTAATTCGGCTGCGAGACGGTTAATGAATCTTCTCAAGTGGCATAAGAGGAGTAAAAGAAAAGAAGCAGCCTCGGAATTCGAAGGCGACGATGAATCTGTTAACAATTCTCTAAATtcaaggaaaaataatttagaagaGTCACCAATCTCATCATTAAGGCAAAGATACTCAAAACAATGTTTTCTTCCAAACAACAAAAGAACACTATCTATAAGGACTTTACTTCCAACACAATCTGCAAAGAAATATTTCACTGCTGGCCTAATGCAAGGTGTGATTAAGGTAAAGCCACAAATAGAAAGGTCTAATTTGTCTGATTCTTCAAACAATAAGCAAAAACATGTTGATACAATGGGACCAGTAAATGATGGAGGTACCCTACAGTTGAACTATAAGgagaaaaatttgaataagaAATTGATGAAcagatatttttcttttggagCACAAGGGCAGGCTTTGAAAGATGCAAATACTTGCTCAATGTCAAATCATAGTTCTAAGTGTTTCAGTTATTTATAG 1974 0.3521 MAPSYFPLRWESTGDQWWYATPIDLAAANGLYDLVTELLHFDTNNLIKLTSLRRIRRLETVWDDDESQFQDVAKCRSYVARKLLIECEETGTGKNSLINGGYGGWLLYTAASAGDLEFVHELLRRDSLLVFGEGEYGVTDMLYAAARSKNSEVFNMILDFALLGREFSIVELDESGADGGGVFMREILNRAIHAAARGGNWEILKKQLILGSASKILLSYRDAQGCTVLHSAAGRGQVEVVRNLILLSPDIINSTDYQGNTALHVACCRGYLSVVEILIQASPSLTMLTNKNGDTFLHMAVYGFTSPDFCKLDKHNELMNQLLLTEKIANLKDIINVKNNVGRTAIHLAVIHDVQCDVVESMMSVKSIDLNIRDADGMTPFDYLKQRPRSRTSKLLIKQFISAGSFINREDYMTRNAIVTHLKTHHGIRGSPGTLFRIPDSKIFLYSCTDNDQASVESNSCSIEVESNYDSAENSSINSKTSSVNSAARRLMNLLKWHKRSKRKEAASEFEGDDESVNNSLNSRKNNLEESPISSLRQRYSKQCFLPNNKRTLSIRTLLPTQSAKKYFTAGLMQGVIKVKPQIERSNLSDSSNNKQKHVDTMGPVNDGGTLQLNYKEKNLNKKLMNRYFSFGAQGQALKDANTCSMSNHSSKCFSYL 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01226 657 MobiDBLite consensus disorder prediction 513 533 - -
Tsu02g01226 657 ProSiteProfiles Ankyrin repeat profile. 258 290 IPR002110 GO:0005515
Tsu02g01226 657 ProSiteProfiles Ankyrin repeat region circular profile. 258 280 - -
Tsu02g01226 657 SUPERFAMILY Ankyrin repeat 107 398 IPR036770 -
Tsu02g01226 657 Gene3D - 13 177 IPR036770 -
Tsu02g01226 657 MobiDBLite consensus disorder prediction 587 610 - -
Tsu02g01226 657 MobiDBLite consensus disorder prediction 505 533 - -
Tsu02g01226 657 PANTHER ANKYRIN REPEAT FAMILY PROTEIN 1 651 - -
Tsu02g01226 657 Pfam Ankyrin repeats (3 copies) 192 282 IPR002110 GO:0005515
Tsu02g01226 657 ProSiteProfiles Ankyrin repeat profile. 224 256 IPR002110 GO:0005515
Tsu02g01226 657 SMART ANK_2a 258 287 IPR002110 GO:0005515
Tsu02g01226 657 SMART ANK_2a 224 254 IPR002110 GO:0005515
Tsu02g01226 657 SMART ANK_2a 341 372 IPR002110 GO:0005515
Tsu02g01226 657 SMART ANK_2a 102 131 IPR002110 GO:0005515
Tsu02g01226 657 SMART ANK_2a 376 409 IPR002110 GO:0005515
Tsu02g01226 657 SMART ANK_2a 292 331 IPR002110 GO:0005515
Tsu02g01226 657 SMART ANK_2a 18 48 IPR002110 GO:0005515
Tsu02g01226 657 SMART ANK_2a 136 169 IPR002110 GO:0005515
Tsu02g01226 657 Gene3D - 187 403 IPR036770 -
Tsu02g01226 657 PANTHER ANKYRIN REPEAT, PH AND SEC7 DOMAIN CONTAINING PROTEIN SECG-RELATED 1 651 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01226 Tsu-Chr2 10372864 10375992 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g01226 100 382 Miscellaneous Gene Families AT2G31820 29.617 1.12e-17 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01226 - - gmx:100791999 808.135
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g01226 02 10372864 10375992 Tsu02g01226 02 10372864 10375992 ECH