Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01211 ATGATCGGAACTGGAACAACAACCGCTCGTAACAGACTCATATCTCCCTCTCAAACCGACGCAGAACCTCGTGTCATTACTCCATTTCCCGCGCCAAAGATCATGGACCTTCCTCAGTTTCAAGGTGAGCATAAGGAGAGTTTGTATTGGGGAACTTATCGTCCTCATCTCTATCTTGGAATTCGTGCCAGGACTCCACAATCTCTGATGGCTGGATTAATGTGGATTGGTGTGAAGGACGGTAACAATCACCTGAGGCATGTCTGTAAGCATGAGGATGACTTAAGTGCTTATGGTTGGGGAAAGCACAATGGACGTGATTATGGGCATCAAGTACTGGTTGACCATGGCATGATCTTGACTACTGAGTTCTTAAAATCAAAGGGGGACGACAGTGGTTATGGAGGGGACTGGGCCGTTCGAATTGATGTGCAGGTTGATAAGTCTAAGTGGAATGAAGAATTTGGGAGAGATGCCCAGCTCTTTTTCTATTTGGCTGATGAAGGTGGTAATGTTCTTGATGTAGGTAAAGACAACTTGAATGTTCGTAAGAGTTCATTACTTGCATCTGGCTCTCGAACAGACATTGGAGACTGGCAGCTACATTTAAAGTCAACGGATGATCTAAAATTGCATTACTCTGGATTTCACACACCTCACTTTCACAATTTGTCTGATCTTGTTGAGGGAAACCTTGCATCACAAACAAGAAAGCATGGTCAAGCGCAGCTATCTGACTCATCAGATGATTCTCCTAATGTGTTAGCTTTTCAGATTATTGGTGGCTTTCCTTTCACTACAGATATTGTGTTTATCTCTGGAACTGATTCAGAAAGTTCAAGAGTAGAAGAGCGTGTCAATAGTCTTGCAGGAGCCTCACTGTCGAATGAACTGAAATATAAAGAACAAGCATATGATGAAAAGTTtgagaaaattttcaatttggCTGAGAAGGTGGATTCTGAATCCATTTCTGTTGGTAAGGCTGCGGTTGGAAACTTATTAGGTGGCATCGGCTACTTCTATGGCCAGTCAAAAATTGCTCTGTCAAGACCCCTTAATgATAGAGAACAAGTTGATTATCTATCATATTGGCCTGCTGAGCTTTACACAGCTGTGCCATGCCGACCAATCTTCCCAAGAGGATTTTTATGGGATGAAGGTTTTCATCAACTTGTAATCTGGCGCTGGGATGTTCATATTTCATTGGATATCATTGGACACTGGCTAGATTTGATGAACATTGACGGATGGATACCACGAGAACAAATTCTGGGGGCTGAAGCACTAAGTAAGATCCCAGCGGAATATGTTGCTCAGCATCCAACAAATGGAAATCCTCCAACTCTGTTTTTAGCATTAAGTgGTATAATCAATGCCTTGAAGAATAATGAGTTTAATGCAATGGATAGAAGCGAGATTTCTCTGTTTATGGAGCGTGCCTTTGGTCGATTAGAAGCATGGTTTCAGTGGCTCAATAATACTCAATCAGGGGAACAGATGAGCAGCTACTATTGGCGTGGACGGGACAATAGGACAATACTTGAATTAAATCCCCAGACGCTGTCCTCTGGATTTGATGATTATCCACGTGCTTCTCACCCAAGTTCAGATGAACGCCATCTGGATCTTAGATGTTGGGTGTTACTTGCAGCAGAATGTATGCATTCCATTGAAGAGTTGTTGAATAAGGAAACCAAACCTGGAAAGAATTATGGTTCGACTGTGAAATTGTTATCAAATCTAGAGTTATTGAACGAGATGCATTTTGATGACGCATATGGTGCTTACTTTGATTTCGGAAATCATACGGAAAAGGTTCGACTTGAATGGAAAGAATTGAAAGCAGGACACAATCACGCGACTCGCCAGCTTGTCCGAGAAGTTTTGGAGAGGCCTGTATTGAGACTGGTTCCTCATATTGGTTATGTTAGTTTCTTCCCATTCATGGGGAGAATCATTCCATCTGGATCATGGATCCTGGAAAAGCAGCTTGAACTCATTTCAAACCGCAGCCAATTATGGACTGACTATGGACTACGTTCTCTTGCCAAAACAAGTTCCTTGTACATGAAGTACAACACAGAACATGATGCTCCATATTGGAGAGGTACAATTTGGATAAACATGAATTACAGAGTTCTTTCAGCACTCCATCATTATTCAGAAGAGAGTGGACCATATCAGGACAAAGCCAAAGCCATCTACAAAGAATTGAGGAGCAATTTAATTAGAAATATGGTGCACAATTATCATCAGACTGGTTTTTTGTGGGAGCAGTACGATCAGGATAAAGGGAACGGAAAAGGGGCACATCCATTTACAGGTTGGACATCGGTTGTAGTATTGATCATGGCGGAAGCATATGACACAATTTAA 2379 0.4166 MIGTGTTTARNRLISPSQTDAEPRVITPFPAPKIMDLPQFQGEHKESLYWGTYRPHLYLGIRARTPQSLMAGLMWIGVKDGNNHLRHVCKHEDDLSAYGWGKHNGRDYGHQVLVDHGMILTTEFLKSKGDDSGYGGDWAVRIDVQVDKSKWNEEFGRDAQLFFYLADEGGNVLDVGKDNLNVRKSSLLASGSRTDIGDWQLHLKSTDDLKLHYSGFHTPHFHNLSDLVEGNLASQTRKHGQAQLSDSSDDSPNVLAFQIIGGFPFTTDIVFISGTDSESSRVEERVNSLAGASLSNELKYKEQAYDEKFEKIFNLAEKVDSESISVGKAAVGNLLGGIGYFYGQSKIALSRPLNDREQVDYLSYWPAELYTAVPCRPIFPRGFLWDEGFHQLVIWRWDVHISLDIIGHWLDLMNIDGWIPREQILGAEALSKIPAEYVAQHPTNGNPPTLFLALSGIINALKNNEFNAMDRSEISLFMERAFGRLEAWFQWLNNTQSGEQMSSYYWRGRDNRTILELNPQTLSSGFDDYPRASHPSSDERHLDLRCWVLLAAECMHSIEELLNKETKPGKNYGSTVKLLSNLELLNEMHFDDAYGAYFDFGNHTEKVRLEWKELKAGHNHATRQLVREVLERPVLRLVPHIGYVSFFPFMGRIIPSGSWILEKQLELISNRSQLWTDYGLRSLAKTSSLYMKYNTEHDAPYWRGTIWINMNYRVLSALHHYSEESGPYQDKAKAIYKELRSNLIRNMVHNYHQTGFLWEQYDQDKGNGKGAHPFTGWTSVVVLIMAEAYDTI 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01211 792 PANTHER MANNOSYL-OLIGOSACCHARIDE GLUCOSIDASE 14 790 IPR004888 GO:0004573|GO:0009311
Tsu02g01211 792 Pfam Glycosyl hydrolase family 63 C-terminal domain 291 787 IPR031335 -
Tsu02g01211 792 Gene3D - 317 791 IPR012341 GO:0005975
Tsu02g01211 792 Pfam Glycosyl hydrolase family 63 N-terminal domain 47 212 IPR031631 -
Tsu02g01211 792 MobiDBLite consensus disorder prediction 1 22 - -
Tsu02g01211 792 PANTHER ALPHA-GLUCOSIDASE 2 14 790 - -
Tsu02g01211 792 MobiDBLite consensus disorder prediction 1 23 - -
Tsu02g01211 792 SUPERFAMILY Six-hairpin glycosidases 300 789 IPR008928 GO:0005975
Tsu02g01211 792 Gene3D - 35 316 IPR038518 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01211 Tsu-Chr2 10224756 10234241 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g01211 23 789 Glycoside Hydrolase AT1G24320 58.854 0.0 950
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01211 K01228 - gmx:100795161 1333.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g01211 02 10224756 10234241 Tsu02g01211 02 10224756 10234241 ECH