Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01193 atggATCCAGACGCGTTGGCAAAGGCATTCGTTGAGCACTACTACACCACCTTCGATAACAATCGCGCTGGACTTTCTACTCTTTACCAGGAAGGTTCTATGCTCACCTTCGAAGGTCAGAAGATTCAAGGTTCCCCTAACATCGTCGCTAAACTCACTTCTCTCCCTTTTCAGCAGTGTCATCACTCCATTACCACCGTCGATTGTCAACCTTCCGGTGTTAACGCCGGCATGCTCGTCTTCGTTAGTGGTAATCTCCAACTCGCTGGTGAACAACATGCCCTCAAATTCAGCCAGATGTTCCATTTGATACCAACACAGCAAGGAAGCTATTATGTGCTGAATGACATATTCCGTTTGAACTATGCTTGA 372 0.4624 MDPDALAKAFVEHYYTTFDNNRAGLSTLYQEGSMLTFEGQKIQGSPNIVAKLTSLPFQQCHHSITTVDCQPSGVNAGMLVFVSGNLQLAGEQHALKFSQMFHLIPTQQGSYYVLNDIFRLNYA 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01193 123 PANTHER BNAA07G08920D PROTEIN 1 123 - -
Tsu02g01193 123 Pfam Nuclear transport factor 2 (NTF2) domain 7 120 IPR002075 -
Tsu02g01193 123 PANTHER NUCLEAR TRANSPORT FACTOR 2 1 123 IPR045875 GO:0006913
Tsu02g01193 123 SUPERFAMILY NTF2-like 3 121 IPR032710 -
Tsu02g01193 123 CDD NTF2 2 122 IPR018222 -
Tsu02g01193 123 Gene3D - 1 123 - -
Tsu02g01193 123 ProSiteProfiles Nuclear transport factor 2 domain profile. 6 120 IPR018222 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01193 Tsu-Chr2 9991070 9993257 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01193 - - gmx:100777334 234.572
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g01193 02 9991070 9993257 Tsu02g01193 02 9991070 9993257 ECH
Tsu07g02683 07 31349482 31351939 Tsu02g01193 02 9991070 9993257 PCT