Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01150 ATGGCGTCGTGTTCTGCATCACTCTCTCACTTCTCTCGCATTTCACTTTCTCTCCAACACGATAACAACAACAAGATCCCTCAATCTCAATGCCATCATTTCCTCCTCTCCCGCCGTTTCAACTCTCTCCGAAAGGGAATTACTTTACCTCGCCAAAGAAAGTCTCCGAGCAATGGGATATGTGCCTCATTTACAGATGTTTCGCAGAACGTGGATGTGGAAgaaaaaggggtgcaaaaaggAGAATCTTGGTCTGTTCACAAATTTGGTGGAACATGTATGGGAAGCTCCCAAAGAATAAAGAATGTAGGAGACATAGTTCTTAATGATGATTCAGAGAGGAAATTGGTGGTTGTTTCTGCAATGTCTAAGGTGACAGATATGATGTATGAGCTTATCAACAAGGCTCAATCGCGTGATGAATCTTATATTTCTTCCTTAGATGCTGTTTTGGAGAAGCATAGCTCAACTGCGTATGATATACTTGATGGAGACAATCTCGCTATTTTCTTATCTAAATTGCACGAAGACATCAACAACCTTAAAGCGATGCTTCGGGCAATATACATAGCTGGTCATGCGACAGAATCCTTTACAGATTTTGTTGTAGGACACGGGGAATTATGGTCTGCCCAACTGTTGTCTCTAGTTATCAGGAAGAATGGAGCTGATTGCAAATGGATGGATACAAGGGAAGTCTTGATTGTAAATCCTACTAGTTCTAATCAAGTTGATCCTGACTATTTGGAATCTGAGCAAAGACTTGAGAAATGGTACTCTCTGAATCCATGCAAGGTAATCATTGCTACTGGGTTCATTGCAAGCACACCTAAAAATATTCCTACTACACTGAAGCGAGATGGAAGTGATTTCTCGGCAGCAATTATGGGTGCTCTGTTCAAAGCTCGTCAGGTCACAATTTGGACAGATGTTGATGGTGTGTATAGTGCAGATCCTAGAAAAGTTAGTGAGGCTGTGATTCTGAAGACATTGTCTTATCAAGAGGCATGGGAAATGTCTTACTTTGGAGCTAATGTTTTGCATCCCCGCACAATAATTCCTGTGATGCGATATGGCATACCCATTTTGATAAGGAATATCTTCAACCTTTCTGCTCCTGGGACAAAGATATGTCATCCTTCTGTTAGTGATAATGAAGATACAATGAACCTGCAAAATTATGTCAAAGGATTTGCAACAATAGACAACTTGGCACTTGTAAATGTTGAGGGAACTGGAATGGCTGGTGTTCCAGGTACAGCCAGTGCTATTTTTGGTGCAGTAAAAGATGTTGGAGCTAATGTTATCATGATATCTCAGGCTAGTAGTGAGCATTCTGTATGCTTTGCTGTGCCCGAGTCGGAAGTAAAAGCTGTTGCCGAGGCATTGCAATCAAGATTTCGTCAAGCTTTGGATAATGGGCGTCTTTCTCAGGTTGCAGTTATCCCGAATTGTAGCATTTTGGCTGCTGTTGGCCAGAAAATGGCAAGCACTCCTGGAGTTAGTGCCACCCTTTTCAATGCATTGGCTAAGGCCAGTATAAATGTCCGTGCTATAGCACAAGGCTGTTCTGAGTATAATATTACTGTTGTTGTTAAGCGAGAGGACTGTATAAAAGCTTTACGGGCTGTGCATTCCAGATTTTATCTCTCAAGAACCACCATTGCAATGGGCATTATTGGACCAGGATTAATTGGGAGCACACTTCTTGATCAGCTAAGGGATCAGGCTTCAGTTCTGAAAGAAGAATTTAACATTGATTTGCGTGTAATGGGCATAATTGGCTCAAAGTCGATGCTTCTCAGTGATTCGGGTATTGACTTAGCAAGGTGGAAAGAACTTCGCGAGGAAGGAGGAGAAGTGGCTAATTTGGAAAAATTTGCTCAGCACGTGCATGGAAATCATTTTATACCAAACACGGCAATAGTAGACTGCACAGCTGATCCTGGCATTGCTGGCCATTACTATGATTGGTTGCGCAAAGGAATACATGTAATTACCCCCAATAAGAAGGCAAATTCAGGACCGCTTGATCAGTATTTGAAGTTAAGAGCTCTTCAGAGGCAATCATACACTCACTACTTCTATGAAGCTACTGTTGGAGCTGGTCTTCCCATTGTCAGCACTTTGCGTGGCCTCCTTGAAACTGGAGACAAAATTTTGCAAATTGAAGGCATTTTCAGTGGGACTTTGAGTTACATCTTTAATAGCTTCAAAGATGGCCGGGCTTTTAGCGAGGTAGTTGGTGAAGCAAAGGAAGCAGGTTTTACTGAGCCTGATCCAAGGGATGATCTGTCTGGAACAGATGTTGCTAGAAAGGTGATAATTCTTGCAAGGGAATCTGGTTTAAAGCTAGAACTGTCTGATATTCCAGTTCAAAGTCTAGTGCCAGAACCACTACAAGCGTGTGCATCAGCTCAGGAGTTTATGCAACAGCTACCAAAATTTGACCCGGAGTTTGCAAAGAAACAAGAAGATGCTGATAATGCTGGGGAAGTATTGAGATACGTGGGAGTGGTGGACGTGACAAATCAAAAAGGAGTTGTAGAACTACGAAGATACAAGAAGGATCACCCATTTGCACAGCTGTCTGGGTCAGATAACATAATTGCATTCACAACAAGAAGGTACAAGAATCAACCTCTGATAGTTCGTGGGCCAGGAGCTGGAGCTCAAGTCACAGCAGGTGGAATATTTAGCGATATTTTACGACTTGCTTCATATCTAGGTGCTCCGTCATAG 2742 0.4205 MASCSASLSHFSRISLSLQHDNNNKIPQSQCHHFLLSRRFNSLRKGITLPRQRKSPSNGICASFTDVSQNVDVEEKGVQKGESWSVHKFGGTCMGSSQRIKNVGDIVLNDDSERKLVVVSAMSKVTDMMYELINKAQSRDESYISSLDAVLEKHSSTAYDILDGDNLAIFLSKLHEDINNLKAMLRAIYIAGHATESFTDFVVGHGELWSAQLLSLVIRKNGADCKWMDTREVLIVNPTSSNQVDPDYLESEQRLEKWYSLNPCKVIIATGFIASTPKNIPTTLKRDGSDFSAAIMGALFKARQVTIWTDVDGVYSADPRKVSEAVILKTLSYQEAWEMSYFGANVLHPRTIIPVMRYGIPILIRNIFNLSAPGTKICHPSVSDNEDTMNLQNYVKGFATIDNLALVNVEGTGMAGVPGTASAIFGAVKDVGANVIMISQASSEHSVCFAVPESEVKAVAEALQSRFRQALDNGRLSQVAVIPNCSILAAVGQKMASTPGVSATLFNALAKASINVRAIAQGCSEYNITVVVKREDCIKALRAVHSRFYLSRTTIAMGIIGPGLIGSTLLDQLRDQASVLKEEFNIDLRVMGIIGSKSMLLSDSGIDLARWKELREEGGEVANLEKFAQHVHGNHFIPNTAIVDCTADPGIAGHYYDWLRKGIHVITPNKKANSGPLDQYLKLRALQRQSYTHYFYEATVGAGLPIVSTLRGLLETGDKILQIEGIFSGTLSYIFNSFKDGRAFSEVVGEAKEAGFTEPDPRDDLSGTDVARKVIILARESGLKLELSDIPVQSLVPEPLQACASAQEFMQQLPKFDPEFAKKQEDADNAGEVLRYVGVVDVTNQKGVVELRRYKKDHPFAQLSGSDNIIAFTTRRYKNQPLIVRGPGAGAQVTAGGIFSDILRLASYLGAPS 913
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01150 913 SUPERFAMILY ACT-like 393 468 IPR045865 -
Tsu02g01150 913 Pfam Homoserine dehydrogenase 705 903 IPR001342 GO:0006520
Tsu02g01150 913 TIGRFAM asp_kinases: aspartate kinase 84 548 IPR001341 GO:0004072|GO:0008652
Tsu02g01150 913 ProSitePatterns Aspartokinase signature. 86 94 IPR018042 GO:0004072|GO:0008652
Tsu02g01150 913 Gene3D - 86 377 IPR036393 -
Tsu02g01150 913 CDD AAK_AK-HSDH 84 378 IPR041743 -
Tsu02g01150 913 PANTHER - 1 913 IPR011147 GO:0004072|GO:0004412|GO:0009067
Tsu02g01150 913 Pfam Amino acid kinase family 85 366 IPR001048 -
Tsu02g01150 913 Pfam Homoserine dehydrogenase, NAD binding domain 561 697 IPR005106 GO:0016491|GO:0050661
Tsu02g01150 913 Gene3D Aspartokinase, catalytic domain 123 222 IPR042199 -
Tsu02g01150 913 ProSiteProfiles ACT domain profile. 490 567 IPR002912 -
Tsu02g01150 913 CDD ACT_AKi-HSDH-ThrA_2 485 550 - -
Tsu02g01150 913 Gene3D - 556 905 - -
Tsu02g01150 913 CDD ACT_AKi-HSDH-ThrA-like_1 404 483 - -
Tsu02g01150 913 ProSitePatterns Homoserine dehydrogenase signature. 751 773 IPR019811 GO:0006520
Tsu02g01150 913 SUPERFAMILY ACT-like 472 564 IPR045865 -
Tsu02g01150 913 Gene3D - 391 550 - -
Tsu02g01150 913 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 705 890 - -
Tsu02g01150 913 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 553 727 IPR036291 -
Tsu02g01150 913 Pfam ACT domain 483 546 IPR027795 -
Tsu02g01150 913 Gene3D Dihydrodipicolinate Reductase; domain 2 716 887 - -
Tsu02g01150 913 Pfam ACT domain 413 467 IPR002912 -
Tsu02g01150 913 ProSiteProfiles ACT domain profile. 409 484 IPR002912 -
Tsu02g01150 913 SUPERFAMILY Carbamate kinase-like 85 379 IPR036393 -
Tsu02g01150 913 PANTHER ASPARTOKINASE-HOMOSERINE DEHYDROGENASE 1 913 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01150 Tsu-Chr2 9506121 9516726 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01150 K12524 - gmx:100812202 1623.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g01150 02 9506121 9516726 Tsu02g01150 02 9506121 9516726 ECH