Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00893 ATGGCATCATCAACAGTAATTGCAATGACCATGATCAATACAAAGTGCTTAAACAACACTTCTAATTCACCAAAACTTCCCAACCAAACAAAACTCATTACAAAACCAACTTCACTTCTTTCCCTTAAAAACCTTTTTCCAAAGAAATTTCCCACCACAACAGAAAACACAAAACTATCAACTTCCATAGCAGGAACAGCACTAGCAGGAGCAATATTCTCAACACTTGGAACATGTAACCCTGCTTTTGCAGCACAACAAATAGCTGAAATAGCAGAAGCAACATCAGATAATCGCGGTTTAGCACTTTTGTTACCATTAATTCCAGCTATAGCTTGGGTTCTTTATAACATTCTTCAACCAGCACTTAACCAAATCAATCGTATGCGTAACGATAAAGGCGTTATCATTGGTTTGGGTCTTGGTGGATTAACAGCTTCTTCAGGGTTTTTGTCACCACATGATGCAATGGCTAGTGAAATAGCTGCAATTGCTGAAGCTGGTAGTAGTGATAATAGGGGTCAGCTTCTGTTGTTTGTGGTAACACCAGCTATTCTTTGGGTTCTTTACAATATTTTGCAGCCTGCTCTTAATCAAATCAACAGAATGAGATCAGATTGA 621 0.3833 MASSTVIAMTMINTKCLNNTSNSPKLPNQTKLITKPTSLLSLKNLFPKKFPTTTENTKLSTSIAGTALAGAIFSTLGTCNPAFAAQQIAEIAEATSDNRGLALLLPLIPAIAWVLYNILQPALNQINRMRNDKGVIIGLGLGGLTASSGFLSPHDAMASEIAAIAEAGSSDNRGQLLLFVVTPAILWVLYNILQPALNQINRMRSD 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00893 206 Hamap Photosystem II protein Y [psbY]. 97 131 IPR009388 GO:0009523|GO:0015979|GO:0016021|GO:0030145
Tsu02g00893 206 PANTHER PHOTOSYSTEM II CORE COMPLEX PROTEINS PSBY, CHLOROPLASTIC 1 205 IPR038760 GO:0009523
Tsu02g00893 206 Pfam Photosystem II protein Y (PsbY) 97 129 IPR009388 GO:0009523|GO:0015979|GO:0016021|GO:0030145
Tsu02g00893 206 Pfam Photosystem II protein Y (PsbY) 171 203 IPR009388 GO:0009523|GO:0015979|GO:0016021|GO:0030145
Tsu02g00893 206 PANTHER PHOTOSYSTEM II CORE COMPLEX PROTEINS PSBY, CHLOROPLASTIC 1 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00893 Tsu-Chr2 7491323 7493236 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00893 K02723 - vvi:100252545 233.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00893 02 7491323 7493236 Tsu02g00893 02 7491323 7493236 ECH