Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00888 ATGGAAATGGTACCTCGGAAGATGCAATCTAGAGCTACCCGCCACATTTTTTCTGCATCAGATGACACGGTCATGACAAAACAAATCCGCGCCACTCATGCTCCTATTGAAGAACATGTTGATGCTAGACCACTACTTTATGTTGTTCAAGACATTTTTCGCCAGGCAGCTTCTCTAATCCCCGACATCGTTCAGGGAAAGCAAGTGCAAATGGGTGCCATGAAGGATAATACCAACGAATCTGACTTATTTGACATGCTAGAGATTTCTTATCACACAATTAACAAAATTTCATGCGAGATATCTTGCAAATGTTTGATGGGTGGAGGAGATGCGCATGCTACAACAATTGGAATACTTGGAATGCTATCAAGCTATTCATGGGATGCGAAAGCGGTGATAGCCTTAGCAGCATTTGCAGCTAACTTGGGGGAGTTTTGGCTAGTTGCTCAACTTTATGCGACCAACCGTCTTGCTAAGTCAGTTGCATTGTTGAAGCACATTCATGAAACACTGAATCATGTGGATGATTTAGGACCAAAATTTGAAGCCGTGAACAACCTTCTCAAGGCCATGTTGGATGTTACCAATTGCATTGTTGAGTTTCATGAGCTTCCTGATCAGTATATTGACTATGAAGCACCTGAAACACAAACTGCTTCCTCTCTTATTCCAAGTGCTGTCTATTGGACCATTAGGAGTATTGTGGCTTGTGCATCACATATTTTAGGCATTATTGGCTTGGGTCAAGGATATATGACATCAACAATTGAGACATGGGAGCTTTCAAGTTTGACTCATAAGCTAGACAACATGAATGGTCACCTACAAAAGCAGCTCAGCATTTGTCGTCAACATTTAGATGATAACAAACAGAGAGAAGCATTTCAGACACTTTGCCACCTTTTTGAGACATCCCACCAAGATAACATTCAAGTTCTCAAAGCTTTGATTCGCTGCAAAGATGATCCATTGCCACTGTTTAATGGTTCTACCAAGCAAAGGGTTAGCATTGAAGTATTGAGGAAGAAAATTGTGTTGCTCTACATAACAGACCTCCACCATATATCTGATCAAGAGGTTGTGATTTTTGAACAAATGTTTCAAGAGTCGCGTCAAGATTCAACAAGGTTAGAGAGTCAATACGAACTCGTTTGGATTCCAGTTGTCGAAAAGGGAACCGCGTGGACCGAATCGAAACTGAAGTTCGAGAAGCTGCAATCAATGATGCCATGGTACTCAGTTTATGACCCTTCACTTTTGGAGCCAGCAACCATTAGGTACATTAAGGAAGTGTGGCTTTTTAACACAAAGCCTATGCTTGTGGTGTTGGATCCACAAGGGAAGGTTGTGAACTTGAATGCAGTACATATGATGTGGATTTGGGGAAGCATGGCTTATCCTTTCTCTAGCTTAAGAGAGGAAGCTCTTTGGAAAGAGGAAACATGGGGACTTGCACTATTGGCTGATACAATTGATCCATTACTCTTTGATTGGGTATCAACAGGCAAATACATATGCTTGTATGGAGGCGATGATATGGAATGGATCCGTAAATTCACAAGTGCAGCGAAATCAATGGCAAGAACTCTACAAATTCCACTAGAAATGATGTATGTAGGAAAAAGCAACCCAGGACAGAAAGTtagaaaaatcaacaaaacaatataTGAAGAAAATTTGAGCAGCATACTCGCCGACCCAACCATAATTTGGTTCTTCTGGGTTAGGTTAGAAAGCATGTGGCACTCAAAATTACAACAAAGCAAGACAGTAGAGAATGACCAAATAATGTTAGAAATAATGAGAATCTTAAGCTTTGATAGCAGTGATCAAGGTTGGGCTGTTATAAGTCAAGGCACAGTAAAAATGACACAAGGCAAAGGAGATTCATTTTTAAAGTGTCTTAATGAATTTGATGAGTGGAAAGATAATGTGAATGATAAAGGAGTTTTGCCTGCCATGGATGATTATATACAAGGAATCCAACAACCACACCATTGCAACAGATTAATACTTCCAGGAGTTGAAGGCACAATTCCAGACAAGATTGTTTGTGCTGAATGTGGCCAGCCAATGGAAAAATTCTACATGTATCGCTGCTGCAATGAGTGA 2115 0.4024 MEMVPRKMQSRATRHIFSASDDTVMTKQIRATHAPIEEHVDARPLLYVVQDIFRQAASLIPDIVQGKQVQMGAMKDNTNESDLFDMLEISYHTINKISCEISCKCLMGGGDAHATTIGILGMLSSYSWDAKAVIALAAFAANLGEFWLVAQLYATNRLAKSVALLKHIHETLNHVDDLGPKFEAVNNLLKAMLDVTNCIVEFHELPDQYIDYEAPETQTASSLIPSAVYWTIRSIVACASHILGIIGLGQGYMTSTIETWELSSLTHKLDNMNGHLQKQLSICRQHLDDNKQREAFQTLCHLFETSHQDNIQVLKALIRCKDDPLPLFNGSTKQRVSIEVLRKKIVLLYITDLHHISDQEVVIFEQMFQESRQDSTRLESQYELVWIPVVEKGTAWTESKLKFEKLQSMMPWYSVYDPSLLEPATIRYIKEVWLFNTKPMLVVLDPQGKVVNLNAVHMMWIWGSMAYPFSSLREEALWKEETWGLALLADTIDPLLFDWVSTGKYICLYGGDDMEWIRKFTSAAKSMARTLQIPLEMMYVGKSNPGQKVRKINKTIYEENLSSILADPTIIWFFWVRLESMWHSKLQQSKTVENDQIMLEIMRILSFDSSDQGWAVISQGTVKMTQGKGDSFLKCLNEFDEWKDNVNDKGVLPAMDDYIQGIQQPHHCNRLILPGVEGTIPDKIVCAECGQPMEKFYMYRCCNE 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00888 704 PANTHER PROTEIN SIEVE ELEMENT OCCLUSION B-LIKE 1 704 IPR039299 GO:0010088
Tsu02g00888 704 Pfam Sieve element occlusion N-terminus 20 307 IPR027942 -
Tsu02g00888 704 Pfam Sieve element occlusion C-terminus 473 703 IPR027944 -
Tsu02g00888 704 PANTHER SIEVE ELEMENT OCCLUSION-RELATED 1 704 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00888 Tsu-Chr2 7450233 7453516 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00888 - - gmx:100799626 1134.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00888 02 7450233 7453516 Tsu02g00888 02 7450233 7453516 ECH