Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00869 ATGGAGCTACTTGGTGAGAAAGTGAGACAAGTTATTATGTCATGGGTTGTAATTTCAACGGTGCTAACTTTAGTTATAGTACCATCATGTTCTGTTTCTGTAACTGAAGCAAAGGAGTGTAGTTTTCCAGCAATATTCAACTTTGGAGATTCAAATTCCGACACCGGTGGCCTCGCAGCAGCTTTCGGACAAGTTCCTCCTCCCAACGGAATCACTTTTTTCAACACTCCTGTCGGACGCTACTCCGATGGTCGTCTCATCATTGATTTCTTAGCACAAAACTTTGGGTTGCCTTATTTGAGTGCCTACTTGGACTCAGTAGGATCAAACTTCAGCAATGGAGCAAATTTCGCAACAGCAGGATCAACCATCCGACCTCATAACAAAACCTTATCTCAGAGTGGATACAGTCCTGTATCTCTAGATGTTCAATTTGTTGAGTACTCTGATTTCAAAGCTAAATCCATACTTATTCGCAAAAAAGGAGGAGTGTTTAAGAAATTGTTGCCCAAAGAAGAGTATTTTTCTAAAGCTTTATACACTTTTGACATTGGCCATAATGATATTACTGCCAGCTACAAACTCAACATGACCACAGAACAAGTTGAAGCATTTATATCCGATGCATTAGGCCAGTTCTCAAATGTCATAAGGAGTGTATACAAGGAAGGTGGAAGGTCATTTTGGATACACAATGTAGGCCCATTGGGCTGTCTCGCATACTTGTTGGATCACTATCCGATGAGTGCGGCCCAAATTGATGAATTTGGTTGTGCCAAACCGTTCAACGAGGTATCCCAATACTTTAACCACAAATTGAATGAAACTATTGTGCAACTTAGGGAAGAGCTTCCAAATGCCACAATCATATATGTTGATGTGTACACAGTGAAGTACAATCTTATTAGCCATGCCCAAAAATACGGTTTTGATGAGAATAGTGTgattgtttgttgtggagaggGTGGAAAGTACAACTTCAATAATAGAGCAAGATGTGGAGCTACTAAGATTGTGAATGgtgaaaaaattgtgatagCTAATTCTTGCAAAGATCCAAGTGTGATGATTATTTGGGATGGAATTCATTTTACTGAAGCTGCTAATAAGTggatttttgaacaaatagctAGTGGAAAATTTTCAGATCCACCAATCTCTTTAAAACCAATCtctttaaaaaatgatttatag 1194 0.3685 MELLGEKVRQVIMSWVVISTVLTLVIVPSCSVSVTEAKECSFPAIFNFGDSNSDTGGLAAAFGQVPPPNGITFFNTPVGRYSDGRLIIDFLAQNFGLPYLSAYLDSVGSNFSNGANFATAGSTIRPHNKTLSQSGYSPVSLDVQFVEYSDFKAKSILIRKKGGVFKKLLPKEEYFSKALYTFDIGHNDITASYKLNMTTEQVEAFISDALGQFSNVIRSVYKEGGRSFWIHNVGPLGCLAYLLDHYPMSAAQIDEFGCAKPFNEVSQYFNHKLNETIVQLREELPNATIIYVDVYTVKYNLISHAQKYGFDENSVIVCCGEGGKYNFNNRARCGATKIVNGEKIVIANSCKDPSVMIIWDGIHFTEAANKWIFEQIASGKFSDPPISLKPISLKNDL 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00869 397 PANTHER BNAA06G32900D PROTEIN 29 389 - -
Tsu02g00869 397 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 29 389 - -
Tsu02g00869 397 CDD SGNH_plant_lipase_like 43 379 IPR035669 -
Tsu02g00869 397 Gene3D SGNH hydrolase 32 380 IPR036514 -
Tsu02g00869 397 Pfam GDSL-like Lipase/Acylhydrolase 45 376 IPR001087 GO:0016788
Tsu02g00869 397 SUPERFAMILY SGNH hydrolase 175 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00869 Tsu-Chr2 7325915 7329666 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00869 43 383 Acyl Lipid Metabolism Gene Families AT4G10950 28.371 4.01e-30 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00869 - - gmx:100803899 585.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00869 02 7325915 7329666 Tsu02g00869 02 7325915 7329666 ECH