Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00776 ATGAGAGTGATGATCGAGACAATTAGAGTGGTGACCGTATTGGTGAGCAGCATTATTTATTCATTCCTACAAGAAATGGGAGTTGGAGGCACTTTGGAGTACTTGTCTGATCTAGTGAGCAGTGGTCACCACCAcctcaagaaaaagaagaagcagtACCAAACTGTAGAGCTAAAGGTTAGGATGGACTGTGATGGCTGTGAACTTAAGATCAAGAAAGCCCTTTCTTCACTAAGTGGGGTAAAATCAGTAGAGATTAACCGTAAACAGCAAAAAGTGACAGTAACTGGGTTTGTGGAGCCAAACAAGGTGTTGAAGAAGGCTAAGTCAACAGGGAAGAGGGCTGAAATTTGGCCTTATGTGCCTTACAATTTGGTGGCTCAACCTTATGCTGTTTCTACTTATGACAAGAAGGCTCCTCCTGGTTATGTGAGGAGAGTGGAGAATGCTCCAACCACTGGAACCATGACAAGATATGAAGACCCTTATGTCAACATGTTCAGTGATGAAAACCCAAATGCATGTTCTATCATGTAG 537 0.4115 MRVMIETIRVVTVLVSSIIYSFLQEMGVGGTLEYLSDLVSSGHHHLKKKKKQYQTVELKVRMDCDGCELKIKKALSSLSGVKSVEINRKQQKVTVTGFVEPNKVLKKAKSTGKRAEIWPYVPYNLVAQPYAVSTYDKKAPPGYVRRVENAPTTGTMTRYEDPYVNMFSDENPNACSIM 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00776 178 PANTHER - 28 178 - -
Tsu02g00776 178 SUPERFAMILY HMA, heavy metal-associated domain 53 119 IPR036163 GO:0046872
Tsu02g00776 178 Gene3D - 42 119 - -
Tsu02g00776 178 PANTHER COPPER TRANSPORT PROTEIN ATOX1-RELATED 28 178 IPR045181 GO:0046872
Tsu02g00776 178 ProSiteProfiles Heavy-metal-associated domain profile. 62 117 IPR006121 GO:0046872
Tsu02g00776 178 CDD HMA 57 116 IPR006121 GO:0046872
Tsu02g00776 178 Pfam Heavy-metal-associated domain 59 113 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00776 Tsu-Chr2 6505334 6509865 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00776 - - gmx:100500473 269.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00776 02 6505334 6509865 Tsu02g00776 02 6505334 6509865 ECH
Tsu02g00776 02 6505334 6509865 Tsu07g02303 07 26079398 26080153 ECH
Tsu02g00776 02 6505334 6509865 Tsu07g02303 07 26079398 26080153 PCT