Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00685 ATGGTAGTGTCTCATGGGAATGCACACTCGGATACTGCGAGGATGGAACAAATAATCACTGAATTTTTCGCGAAAAGTGTTCACATAATACTTGAATCGAGGGCAATTTATGCGTCCTCGCGTAATTCATATGGTGGTTATAAATCAGATTCATCGTCTTCTTCGTCCTCATCGAGTGTGAGGCCGAGGGATAAATGGTTCAATTTGGCACTCCGAGAGTGTCCAGTGGCGTTAGAGAATATTAACAATCATGAGTGTGTTATTGTTGATGTGATTTTGGTTCGTAGGTCTCTAGATTGTGATCCTATGATTCCAAAAAAGGTTCTTTGTAAAGAAAGATATCCACTTTGCTGCAGTGGGGCAGAATTGGGGGTTGACGCGAAGAGTGAAAAGATTGTAGAGAGATGGATTGTGCAATATGAGAATAGGAAGAAGATAAAGAATGCTAATTTTGGCACTAGAAGGTCGAGTAACAATTCCTTGCAAAACGTGTATAAGAAATCAACGTTACTTTTGAGGTCATTGTATGCCACAGTTAGACTTTTACCTGCATATAAAACTTTCAGAGATCTTAATTCGTCTGCACATATTCGTCCCTTTACCCTTGCTCACCGGGTGTCTTCTTTTGTTGAGCCGTTCACCCGAAAACAAGAGTCAGAAATGATGAAATATAGCTTTACTCCTGTGAATACTTCTTCTGGTAGGCTCTGTCTTACGGTGATGTATTGTCCCATGGCCTCGGATTTGAGCTGTGAGCAGTTACCTTCTATGTCCCCTCAAGTTATTTCTGACTATGTTGGAAGTCCATTGGCAGATCCATTGAGGAGGTTCCCATCACTTCCTTTGGCGGGATTGCCATGTCACGGCTGTTCGTCGCCAAGGCGACATAGTTGGAATTTTGATGACAGTAAAGCCTCATCTACTTCCATTAATGATTCGTCTTTGCCTATACATTCAAAATCACAAATATTATTGTCTAATAAAAGTCCGCAGATAAATGATTTGCCACCAAATCCTCACTTAAGAGGTTCAAGGTGTACTTATAAGATTGATAGAAGTACAAATGTGATGCAAACTGGTGCTACAGCCGAGAAGGTGTTTTCTCTAGGAAAAGATGAGGTCCAAAAGTATTCTGGAGTCAGGATATCAGCTAGCAGCTTTCCACGTGTTTCAATTTCCAGTAGGTCTTACCtggatgattttgatgataCTGATTTTAGTTGTCCATTTGATGTGGATTATGATGATATGAAGAATCCAGGAAGCAGAACAAAATCTTTAGATCGTGGTCATATGGCCGAGGCACTTGAAGCTAGAGGGTTCTTTCCCATGAGAAAGTCCAATGATGCTGCTGTCGGTGCACTTGTACATATGCTGAAGAAAGCACCACCTCTCCATCAAGATTTGTACACTTCCGAACACCCTTCAGTACTCTGCGGAGGGCTGCGACTAACAGCAATTCCCTCCTCGAGAGTTAATCTCACAACTAAACCTATGAACATATCTGTTCAGaaaccaaataaagaaaaccTATCGCATGGCACACAATGTGAAACCCGAAACAACATTCAAGAACTCAATAAGAACCAAGAGGCATCTATATCAACTAGGAAAACAACAAGGGATGCATTGGAAGAGTTCCATGGTTACAGAGAGATGAAAAACTCGTTGGTTATGCGAGATATTAAACCACAGATATAA 1701 0.4045 MVVSHGNAHSDTARMEQIITEFFAKSVHIILESRAIYASSRNSYGGYKSDSSSSSSSSSVRPRDKWFNLALRECPVALENINNHECVIVDVILVRRSLDCDPMIPKKVLCKERYPLCCSGAELGVDAKSEKIVERWIVQYENRKKIKNANFGTRRSSNNSLQNVYKKSTLLLRSLYATVRLLPAYKTFRDLNSSAHIRPFTLAHRVSSFVEPFTRKQESEMMKYSFTPVNTSSGRLCLTVMYCPMASDLSCEQLPSMSPQVISDYVGSPLADPLRRFPSLPLAGLPCHGCSSPRRHSWNFDDSKASSTSINDSSLPIHSKSQILLSNKSPQINDLPPNPHLRGSRCTYKIDRSTNVMQTGATAEKVFSLGKDEVQKYSGVRISASSFPRVSISSRSYLDDFDDTDFSCPFDVDYDDMKNPGSRTKSLDRGHMAEALEARGFFPMRKSNDAAVGALVHMLKKAPPLHQDLYTSEHPSVLCGGLRLTAIPSSRVNLTTKPMNISVQKPNKENLSHGTQCETRNNIQELNKNQEASISTRKTTRDALEEFHGYREMKNSLVMRDIKPQI 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00685 566 Pfam Autophagy-related protein 13 19 242 IPR018731 GO:0006914|GO:1990316
Tsu02g00685 566 Gene3D HORMA domain 4 247 IPR036570 -
Tsu02g00685 566 PANTHER UNCHARACTERIZED 353 558 IPR040182 GO:0000045
Tsu02g00685 566 PANTHER UNCHARACTERIZED 9 331 IPR040182 GO:0000045
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00685 Tsu-Chr2 5809946 5813901 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00685 K08331 - gmx:100798585 602.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00685 02 5809946 5813901 Tsu02g00685 02 5809946 5813901 ECH