Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00681 ATGGACTCAGATCTCAAATCGGCCAAATCCGCTTACCAGAACGCCAAAGCAGAGGGTAACCACCGTGAAGAAGCTCGTTGGGCAAACGTCATCGGCGATATACTCAAGAACAGAGGTGAATACGTTAAAGCCCTCAAATGGATCCGAATCGATTACGATGTTTCTCGGAAACACTTACCGGAGAAACACTTGCTCACAACTTGTCAATCCCTCGGTGAAATCTATCTCCGTCTTGAACGTTTTGATGAAGCCCTAACATTCCAGAAAAGACATTTAGATCTTGCGAGGGACGCTGATGATCTTGTTGAGCAACAACGAGCTACGACACAGTTAGGTCGAACTTACTTTGAACTGTTTTCGAGATCAGAACATGATCACAATTCAATTCGCAATGCGAAGAAGTATTTCAAGTCTGCAATGGATTTGGCGGCTAATCTTAAAGAGAATCCGCCGAATAGTAAGTCTTCGTTTCTCAAGGAATATATTGATGCTTATAACAATATAGGAATGCTTGAATTGGAGATTGATAACTTGCACGAGGCGCAGAAGATACTTACTAGAGGATTGGAGATTTGTGATGAAGAGGAGATTAGTGAGTATGATGACGGGCGTAGTAGGTTACATCATAATCTTGGGAATGTTTATATGGAATTGAGGATGTGGAATGAAGCTAGGAAGAATATTAAGAAGGATATTCAGATTTGTCATAAAATTGGACATTGTCAAGGGGAAGCTAAAGGGTATATTAATCTTGGTGAAATGCATTACCGGACTCAGAAGTACGATGAAGCGCGGTCTTTTTATGAGAAGGCGCTTGCTTTGGCTAAGTCTTTGGAGGATGAGGATGCTTTGGTCAGACAGATTAATCAGAATATTAACATTGTTAAATCAGCTGTTGAAGTTATGGACGAAATCAAGAGAGAAGAGCAGAAACTTAAAAAACTCAAGAGAGACATAGTTTCGGCCAGAGGGACACTGAATGAGCGTAAGTGTCTGCTGCTGCAAAACGGGTCTCTTGAAATCCTTGTTGAGAAAGCAAGGACGATCTCTGCTTGGGAGAAGCTTCGTGAATTTgcaaaggagaagaagaaagtagcgAATGACCTTTGTGACAGGCAAAGGTTGGGTGATTCATATCTGGATGTTGCAGAATCATACCAGAAGCTCAGAAAATTCAACAAGGCAATCAAATGGTACAAAAAGAGTTGGGAAATGTACAAAACAATTGGTAACTTAGAGGGGCAAGCACTGGTGAAAATTAATATTGGTAATGTTTTGGATTCTACTCACAATTGGAGAGAAGCATGTGATGCATTTGAAGAGAGCTACAGTATTGCTCGTGACGAAGGCCTTCCTGATGTACAGCTTCTTGCCTTGGAAAATATGCATTATAGCAACATGATTAGATTTGATAATGAGGATGAGACCAGGAGGTTGAAACTTCTAATTGATAAGCTTAAGAAGTCAAGTGAAAAGCAAGAGGCTAATAGTACGCCAGGGGATTGTTGCTCTGAGACTGATACTGAAGCAGATGTTTGTATGTCAAATAGTGAGTCAGATGATTTTTGCTTTCCAAAGACAACTTATAAATCAGAAACCCCAACTCCTGAAGAAGAACTGAATGAGGATAATGCGCCTCTTATGTCGCTGTATCAGTCCTTTAAAGGCTCATCTAGAAAGATAACAGGTCACAAGGAAAGTCATACCAACTCTACAAAGCAGGTTGAGCAATCACCCAGAAGTCTGACAAAATTAACAAGCGAGAATCAAGCAGTTGTTGGTCGTAAACGTGTCCGTATGATTCTTTCcgatgacgatgatgatgagATGGAATGCTCAAGTAGAAAGGATCACGACTGCCCGTTAGAGAACTTGCCTAATTATGAACCAATTAAGAATAAAATCAGTCCTAGTAAAATTCAGGTTGCCCCAGAGTATGGATCTAAATGTGCAATTAATGTTGAAGAAAGCAGCAGTTCCTTCAAATGCTGGAGTCCAAATACCGCCACTAAAACTTCCAGACGTTCCAGGTCATTGAGCAATGATATAGTTGTTGAACCCGAATTTCCTAGTGGTTCTAAATGTGATACAGATGTCTCTGGCAAACAAAATGTTGTTGCCCATCCCATGACACAGCATTCCCAAGATGATCAATATATTACATGTCGGATTGAGAATGATATAGTTTATGTCGAAGCAGCCTTGTGCTCTGCTGGTGATCAGTTTGACATTGACTCGTTAAAGTCTGTAATTGCATGCCTATACTATCAACAATTTCCGACAGAAAAGAAATCAGAGGGTTTGTTACCCATTATTCAGCACATAAAATGTGCTGGAAGAGATCTAGAATCACTGGCAACTGTTGAAAATCTTAAGGAGCATCTGCAAAATAACATGGTTGAAGCTTTCATTGATGGATGGATTCAGAAGCGCCTAATAAAAACGTACGTAGACTGCTGCAAGGAGTTGTCTGAGGAACCAAAGATCAAGGTGCTGAAGAAACTTTACAATTTAGAGGTTTCTGATGATGAAATCATTGCATCGGACTGTGACCTGCAAGATTTGTCTATAACACCATTGATAGATGCACTGCATTCCCAAATGGCATTTTCAATGCTTGACATCTCTCACAATTGTTTAGGAAATGGAACAATGGAGAAACTTCGAAAGGTGTTCACAGCATCAGGTCAATCTTACGGCGGCTTAACTCTGGATTTGCATTGCAATCGATTTGGCCCAACAACATTGTTTCAGATTTGTGAATGCTCTGTGCTATTTGCTCGACTTGAAGTGCTCAACATTTCTGGAAACCGTCTTACTGATGCATGTGGATCTTATCTTTCAACAATCTTAAAAAACTGTACAGCTCTTTGTAGCTTGAATGTAGAGAACTGTTGTATCACAACCAGAACCATTCAAAAAATTGCTGATGCGTTGGACTCTAGATCTGTACTTTCACACCTTTGTATAGGACATAACAGCCCTGTATCTGGGAATGCTTTAGTTAATCTTCTATCGAAGCTTTCTACTTTAAAAAGGTTTTCCGAGTTGAATATGAGTGGTCTAAAACTAGGCAAACCGGTTGTCGATAGCCTTTGCCAGCTTGCAGGGACCTTCACTTTATCAGGACTAATACTTGGAGGCACTGGTATTGGAAATGAAGGGGCCATAAAAGTAACAGAACCATTGCTCAAAGGGACCGAGGAGCTTGTGAAACTTGACCTATCATATTGTGGGCTAACATCTGACTATATTTTAAGCATCAAAGTTGATTCTTTTTGTTCCATCACTGACCTGAGCCTGGAAGGAAATCCTATAATGCTTGAGGGCAGCAATACTCTATTTTCGCTTCTCATAAACCCACAGTGCTGTCTCAAAGTTTTGATACTTAGGAAGTGTCAACTTGGGCTTGCTGGAGTTCTTCGCATAATTGAGGCTCTTGCAGATAACAGCAGCCTGGAGGAGCTTAACCTTGCTGATAATTCTGTTCCGATTGAACTTTCTGCTCTACATTGTGATTTACCATCTAAAAGCTGCTCACAGAACCAGGAAGATAAACTTGATACTATGAAAGTGGATGATAATCAAGAGGTTTTTTGTTCTCTAAATAATTTCGACGAACAGCTGGAAGTTGCTGATAGTGAGGATAATCCAGGTGGAGCAGAAGCTGCTGCTTCTGGAATTGACGACAGCTGTGCCAGTTCATGTCAAAGAAATTCATTTCCCGAGTGCCAATTAACTCAGCAATTTTCAACGGCTATTGCAAAGGCAAAGAACTTGCAATTACTGGACCTTAGCAATAATAGTTTTTATGCACAAACAGCAGAAACATTCTATGGTTCGTGGTCAACTTTACGACCCCTTTCAAGTCACAGGCACATCACTAAGAACATTATTCATTTCTCAACGAAGGAAAAGAAATGCTGCAGCGTGAAACCTTGCTGTAAGAAAGTTTGA 3957 0.3995 MDSDLKSAKSAYQNAKAEGNHREEARWANVIGDILKNRGEYVKALKWIRIDYDVSRKHLPEKHLLTTCQSLGEIYLRLERFDEALTFQKRHLDLARDADDLVEQQRATTQLGRTYFELFSRSEHDHNSIRNAKKYFKSAMDLAANLKENPPNSKSSFLKEYIDAYNNIGMLELEIDNLHEAQKILTRGLEICDEEEISEYDDGRSRLHHNLGNVYMELRMWNEARKNIKKDIQICHKIGHCQGEAKGYINLGEMHYRTQKYDEARSFYEKALALAKSLEDEDALVRQINQNINIVKSAVEVMDEIKREEQKLKKLKRDIVSARGTLNERKCLLLQNGSLEILVEKARTISAWEKLREFAKEKKKVANDLCDRQRLGDSYLDVAESYQKLRKFNKAIKWYKKSWEMYKTIGNLEGQALVKINIGNVLDSTHNWREACDAFEESYSIARDEGLPDVQLLALENMHYSNMIRFDNEDETRRLKLLIDKLKKSSEKQEANSTPGDCCSETDTEADVCMSNSESDDFCFPKTTYKSETPTPEEELNEDNAPLMSLYQSFKGSSRKITGHKESHTNSTKQVEQSPRSLTKLTSENQAVVGRKRVRMILSDDDDDEMECSSRKDHDCPLENLPNYEPIKNKISPSKIQVAPEYGSKCAINVEESSSSFKCWSPNTATKTSRRSRSLSNDIVVEPEFPSGSKCDTDVSGKQNVVAHPMTQHSQDDQYITCRIENDIVYVEAALCSAGDQFDIDSLKSVIACLYYQQFPTEKKSEGLLPIIQHIKCAGRDLESLATVENLKEHLQNNMVEAFIDGWIQKRLIKTYVDCCKELSEEPKIKVLKKLYNLEVSDDEIIASDCDLQDLSITPLIDALHSQMAFSMLDISHNCLGNGTMEKLRKVFTASGQSYGGLTLDLHCNRFGPTTLFQICECSVLFARLEVLNISGNRLTDACGSYLSTILKNCTALCSLNVENCCITTRTIQKIADALDSRSVLSHLCIGHNSPVSGNALVNLLSKLSTLKRFSELNMSGLKLGKPVVDSLCQLAGTFTLSGLILGGTGIGNEGAIKVTEPLLKGTEELVKLDLSYCGLTSDYILSIKVDSFCSITDLSLEGNPIMLEGSNTLFSLLINPQCCLKVLILRKCQLGLAGVLRIIEALADNSSLEELNLADNSVPIELSALHCDLPSKSCSQNQEDKLDTMKVDDNQEVFCSLNNFDEQLEVADSEDNPGGAEAAASGIDDSCASSCQRNSFPECQLTQQFSTAIAKAKNLQLLDLSNNSFYAQTAETFYGSWSTLRPLSSHRHITKNIIHFSTKEKKCCSVKPCCKKV 1318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00681 1318 Coils Coil 295 325 - -
Tsu02g00681 1318 Coils Coil 472 492 - -
Tsu02g00681 1318 PANTHER PROTEIN TONSOKU 2 1317 IPR044227 GO:0005634|GO:0006325|GO:0009933|GO:0040029|GO:0072423
Tsu02g00681 1318 Pfam Tetratricopeptide repeat 67 99 IPR019734 GO:0005515
Tsu02g00681 1318 Gene3D Tetratricopeptide repeat domain 338 467 IPR011990 GO:0005515
Tsu02g00681 1318 Gene3D Tetratricopeptide repeat domain 1 319 IPR011990 GO:0005515
Tsu02g00681 1318 ProSiteProfiles TPR repeat region circular profile. 245 274 - -
Tsu02g00681 1318 SMART LRR_RI_2 1038 1065 - -
Tsu02g00681 1318 SMART LRR_RI_2 1122 1149 - -
Tsu02g00681 1318 SMART LRR_RI_2 954 981 - -
Tsu02g00681 1318 SMART LRR_RI_2 867 894 - -
Tsu02g00681 1318 SMART LRR_RI_2 926 953 - -
Tsu02g00681 1318 SMART LRR_RI_2 1093 1120 - -
Tsu02g00681 1318 SUPERFAMILY TPR-like 161 445 IPR011990 GO:0005515
Tsu02g00681 1318 Pfam Tetratricopeptide repeat 205 277 - -
Tsu02g00681 1318 ProSiteProfiles TPR repeat profile. 245 278 IPR019734 GO:0005515
Tsu02g00681 1318 MobiDBLite consensus disorder prediction 558 584 - -
Tsu02g00681 1318 SMART tpr_5 205 238 IPR019734 GO:0005515
Tsu02g00681 1318 SMART tpr_5 162 195 IPR019734 GO:0005515
Tsu02g00681 1318 SMART tpr_5 25 58 IPR019734 GO:0005515
Tsu02g00681 1318 SMART tpr_5 245 278 IPR019734 GO:0005515
Tsu02g00681 1318 SMART tpr_5 376 409 IPR019734 GO:0005515
Tsu02g00681 1318 SMART tpr_5 416 449 IPR019734 GO:0005515
Tsu02g00681 1318 SMART tpr_5 65 98 IPR019734 GO:0005515
Tsu02g00681 1318 SUPERFAMILY RNI-like 838 1286 - -
Tsu02g00681 1318 Gene3D Ribonuclease Inhibitor 819 1218 IPR032675 -
Tsu02g00681 1318 SUPERFAMILY TPR-like 9 152 IPR011990 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00681 - - gmx:100805682 2006.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00681 02 5774743 5784949 Tsu02g00681 02 5774743 5784949 ECH