Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00660 atgTTTCATTACATTAACAATATCATACATCactatattcaattttttattatggaAGTAGAGCAACATCAACATTTGTTAGCAGATATCATACCCTTGTTAGCTCAAAGTCAGAACAGTAAGGCTAGAAATGAGGTTTCTGTATctttattgaaaataaacaGCATTTCAGAAACATCTCATGATTTTTGCTACCATCCTGAATCCTTTAAGAAGCTTGTGGAAATGGATTTGCCTTGTAATGAGTCTGTGGAGGAAAAACTGTGTTGGTTGCGGTCTCAAATCGTAGGTAATGATGCGGAGTTTGATTCTCTATTTGGAAGACGAAAACTTGTCTATGCTGATCATACTGCTTCTGGTCGAAGTCTTCGttataatgaaaattttatcatcaattatcttcttcctttctatgGTAATACTCATACTTGCGATAGTTATGTGGGAAGTAGGACAACAAAAATGCTACACGAAGCGAATGAGTACATTAAGAAATGCTTAGGTGGTGGCGAAGGCGATGCAATCATCTTCTGTGGCTCAGGCACAACTGCAGCCATCAAGAGGCTTCAAGAAGTAATGGGAATTGCAGTGCCTTCTATTTTAAGGGAAAGAATGTTGAGGTGTCTTagcaaagaagaaaaatggGTGGTTTTTGTAGGACCACATGAGCATCATTCAAATCTCCTTTCTTGGAGGCAGAGTTTGGCTGAGGTTGTAGAGATTGGTCTAGATGATAAAGGGTTGCTCGACATGGAAGCTCTAAAGCTACAGCTTGAAGCCTATAAAAATACGAACCGACCCTTGTTGGGATCTTTCTCAGCTTGTAGTAATGTCACGGGTATCTACTTAGATACGCGCGATATTGCCAAGCTTTTTCACCGATACAAAGGCTATGCATGTTTTGATTTTGCAGCAAGTGGTCCGTATGTGGAGATTGATATGAGATCAGGGGAGATCGATGGATATGATGCCGTGTTCCTTAGTCCACATAAGTTTCTTGGTGGTCCTGACTCTCCGGGAGTGCTTTTGATGAACAAGGCCTTGTATCGGTTGGGATCTTCGCCTCCATCTACTTGTGGAGGCGGAACTGTCACTTATGTCAATGCCTTCAACGAAAAGGACACATTATACATGGAGAACATAGAAGAGAGGGAAAATGGGGGCACACCTCCAATAATCCAAACAGTGAGAGCAGCATTAGCATTTTGGGTGAAAGAATACATTGGCTACAAAGAGATTGAAAAAAGAGAACAATTATACATTAACAAAGCACTTAAGAGACTTGTCACCAACCCCAACATTAAGATTTTGGGAAACTTGAATGCCAAGCGACAAGCTATATTGTCATTTCTCATATATTCTACCACCAATTCTTGTTCATCAACTGAATGGAGAAGTGATAGTAGCCAAGAAAATGAAGAACTTAATTTGTGGCAAGAAATGGGGAGCCAAAGAGGTAAACCACTTCATGGACCTTTTGTTGCAGCTTTGCTTAATGACCTTTTTGGCATTCAAGCTAGAGGTGGATGTGCTTGTGCTGGACCTTATGGACATGACTTACTCAACATCAATAAATCTCAATCACTTGCTATTAGATCATCAGTTCAAGAGgGGTATATTGGAGTAAAACCTGGATGGACACGAGTTAGTTTTCCTTATTACATGAGCGAAGAGGATTTTGAGTACATTCTAAGTGCAATAGAGTTTGTAGCTGTATATGGCCAAAGGTTCTTTCCTCTATACAACTTCAATTTGAGGAATGGAAGTTGGAGAATGAAGACTGAAAAATTTGAGGCATTGCACAATGAAGATAATTGCAAGATTCCTAATAATTTGTTGGGAAAGAATTTAGAGGAAGTAAACATTGATGTTGGAGTTAAACAAGAAAATGTGGCTGTGAGAAGGAACCAGTCTTATTTTGATGTGGCCAAATATATTGCTAGTAGTCTCCCTAAGTTCCCTCCTGAGGCTCGAAATCGTCTGAATCAGACAATTGAAGATAACGGTAATATTGATTTGTGTGAGATTTATGGTTTCGGTGAGGGTTTTATGAGGTTGAGAATGGTGAGACTTTTAGGGTTCGCTCGTGGTTATGCAGATGAACCCCGTGAAATTGAGTCAAAGTCAAACCTGACTAGTGACTCTAGTGAAAATGGTTGGCTTATTAGGTTTTTTGATTCGTCGTTTTTTTGTGAATGGATTGCTGTGAGTTACTTGTACAAGCACGATCATGCTGGGGTGCGTGATTATCTTTGTAATAGAATGTATACTCTTCCCTTGCAAGGGCTTGAGAgttatttgtttcaaatatgtTACATGACAATACATAAGCCTAGTCCGTCCTTGGATAAGTTTGTGATTGATATGTGCTCGAAGTCGCTTAAGATTTCTTTGAAGGTGCATTGGTTCTTAATGGCAGAGCTGGAGGACTCTGATGATAATGATGGGATTAGTAGGATTCAGGAGAAGTGTCAGATGGCAGCCACCTTGATGGGTGAGTGGCCGCCTTTGATACGGCCTCATACTGAACCTCCGAGTCCTGGAGGCAAGAGCCAAGTTTTGAATAGGTTACTTTCGTCTAAAAATCGTTTGTTGTCATTAACAACCTCACCGCCTAAGTCTTTGTCATTTTCTTCTTCGCCGGGAAATAATTTGCAAGACGATGGCAATCCCCTGTCTCCCGATGAGAACAGGATATTTAAGAAGTTTATGCCAAGTCCAAAGGTTAGAGATGCTTTGCTTTTTAGAAAGTCAGCGGACAAAGAAGACGGCGATTCTGAAAAGGATGGGTTTTTTAAGAGGCTTTTAAGAGATAGCAAAGGTGATGATGAGCTTGGCCAAAAAATTCGTGATGCATTTCATTTTCGGAAATCGTCCGAGAAAGATGCGTTAGATTCCGAGAAAGAAAACTTCTTCAAGAGGTTCTTAAGAGACAGTAAGGACAGTACTAGAGGTgatgatgaagactctgaaaaggACGGTTTCTTTCAAAGGATCTTAAGGGACAGTAGAAGCGAAGACGACGATGTGACCTCAAGTTCAGAAGGGTTTTTTAAGAAGTTGTTTCGGGATAGTAAGAATGATCTTGAGGACAgaacaaatacaaaaacagTGGAAGATGAAGAGAAGAACGGACTTTTCCGAAAGTTTTTCCGAGAGAAATTTGAAGATAGGAAGGATGGGCGTgatagaaatgaaaataaaaatgttgcTAATTCTGAAGAGAATTGTCCAAAACCCGATGAAGAGGATGAAAAAGATGGGTTTTTCCGGAAATTCTTCAAGGATAAATTTGAGGACAAGAAAGacacaaaagataaaattgagGAGGGTAATGCCAATGGTGAGGAAGAAGAGCCTTCTGAGGTTTCCTTGTTTAAAAGACTATTCCGCGTGCACCCTGAAGACGACCAAAGTAGTCCAGCCAATGAGATCAATAATGGTGGTTTATTTCAAAGTAGTCCAGGTACAGAGAATTTTTTCCGTAAATTGTTCAAAGACCGTGACCGTTCAATTGAAGATTCAGAGCTATTGGGGTCAAAGCGACAGAAAGAGAAGCATCCTGGTTCCCCAAAGCAGCAAAGTGAAAAATCGAGCACCAAGCCCCCATTACCAATCAATCCAACTCAGTTCCGGAAAGGGGCTTACCATGACTCATTGGAGTTTGTGCAGTCATTATGCGACACATCATATGGGTTAGTGGATGTATTTCCAATTGAAGATCGCAAAAGTGCTCTTCAAGAGTCGCTTAGAGAGATCAATATACATGTAAAAGAGGTTCAGAACACCGGTGGAGTCTGTTTTCCACTGGGAAAGGGCATGTATCGCGTGCTTCATATGCCAGTAGATGAAGCTGTTCTGTTGAATTCTAGGGAGAAGGCACCTTATATGATCTGCATAGAAGTTTTGAGATGTGAAATGCCAAGtaATTTCAAGGAGGCATCCAGTTCTCAGAAGCTTTCTCAAGGTGGAATTCCTTTGGCAAATGGAGATGCTTTCTTGCAAAAACCACCCCCTTGGGCATATCCATTATGGTCAGCACAAGAGGTTTACCGTAATAGCAATGATAGGATGTCCAGATCGACTGCTCAGGCAATTGACCAGGCAATGACTCATGTATCTGAGCCAAAAATCAAACTTGTTAGCCTGAATCTTTCAGTTGAAACACGATACAACGGTCAGGAAGGAGCAGAACATGACAGTGATTTGGAATGGGTACGAGTAGTATTGACAGCTGATCCTGGGGTTAGATTGGAAGATATCGAGGATCAAGCACCACCTCGGAAAAAGGAACATCGCCGTGTTCCAAGTACAGTGGCAATGGAAGAAGTGAAGGCTGCAGCAGCAAAAGGAGAAGCGCCTCTTGGACTCCCTTTGAAAGGTGCTGGCCAAGACTCATCAGATGCACAGCCGAGGGCTAATGGAATTACTCCTAAAGCCAGTGATGCCTTGTCTGGTGAACTTTGGGAAGCAAAGAAAGATAGGGTATGCAAGGCTTCCATATACGGAAAGTTACCCGGTTGGGATTTGCGATCGATTATTGTAAAGAGTGGAGATGATTGCAGGCAAGAGCATCTTGCTGTTCAACTTATTTCTCATTTCTATGATATTTTCCAAGAAGCTGGTCTACCCCTTTGGCTGCGCCCTTATGAAGTTCTGTGTACTTCTTCTTATACAGCTCTCATTGAAACAATTCCAGATACGGCTTCTCTACATTCAATCAAAAGTAGATATCCCAACATCTCAAGTTTACGTGAATTCTTCAATGCTAAATATGAAGAAAATTCTCCAAGTTTTAAACTTGCCCAGAGGAACTTTGTTGAGAGTATGGCAGGATATTCCTTGGTGTGCTACTTTCTGCAGGTGAAGGATAGGCATAATGGGAACCTCCTTTTGGACGAAGAAGGTCATATCATACATATTGACTTTGGCTTCATGCTTTCCAATTCACCTGGTGGGGTTAATTTTGAAAGTGCACCTTTTAAATTAACACGCGAACTTCTTGAGGTTATGGATTCTGATGCCGAGGGTCTGCCAAGCGAGTTCTTTGATTATTTTAAGGTGCTGATAAAAACTTTCTGA 5082 0.3983 MFHYINNIIHHYIQFFIMEVEQHQHLLADIIPLLAQSQNSKARNEVSVSLLKINSISETSHDFCYHPESFKKLVEMDLPCNESVEEKLCWLRSQIVGNDAEFDSLFGRRKLVYADHTASGRSLRYNENFIINYLLPFYGNTHTCDSYVGSRTTKMLHEANEYIKKCLGGGEGDAIIFCGSGTTAAIKRLQEVMGIAVPSILRERMLRCLSKEEKWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDKGLLDMEALKLQLEAYKNTNRPLLGSFSACSNVTGIYLDTRDIAKLFHRYKGYACFDFAASGPYVEIDMRSGEIDGYDAVFLSPHKFLGGPDSPGVLLMNKALYRLGSSPPSTCGGGTVTYVNAFNEKDTLYMENIEERENGGTPPIIQTVRAALAFWVKEYIGYKEIEKREQLYINKALKRLVTNPNIKILGNLNAKRQAILSFLIYSTTNSCSSTEWRSDSSQENEELNLWQEMGSQRGKPLHGPFVAALLNDLFGIQARGGCACAGPYGHDLLNINKSQSLAIRSSVQEGYIGVKPGWTRVSFPYYMSEEDFEYILSAIEFVAVYGQRFFPLYNFNLRNGSWRMKTEKFEALHNEDNCKIPNNLLGKNLEEVNIDVGVKQENVAVRRNQSYFDVAKYIASSLPKFPPEARNRLNQTIEDNGNIDLCEIYGFGEGFMRLRMVRLLGFARGYADEPREIESKSNLTSDSSENGWLIRFFDSSFFCEWIAVSYLYKHDHAGVRDYLCNRMYTLPLQGLESYLFQICYMTIHKPSPSLDKFVIDMCSKSLKISLKVHWFLMAELEDSDDNDGISRIQEKCQMAATLMGEWPPLIRPHTEPPSPGGKSQVLNRLLSSKNRLLSLTTSPPKSLSFSSSPGNNLQDDGNPLSPDENRIFKKFMPSPKVRDALLFRKSADKEDGDSEKDGFFKRLLRDSKGDDELGQKIRDAFHFRKSSEKDALDSEKENFFKRFLRDSKDSTRGDDEDSEKDGFFQRILRDSRSEDDDVTSSSEGFFKKLFRDSKNDLEDRTNTKTVEDEEKNGLFRKFFREKFEDRKDGRDRNENKNVANSEENCPKPDEEDEKDGFFRKFFKDKFEDKKDTKDKIEEGNANGEEEEPSEVSLFKRLFRVHPEDDQSSPANEINNGGLFQSSPGTENFFRKLFKDRDRSIEDSELLGSKRQKEKHPGSPKQQSEKSSTKPPLPINPTQFRKGAYHDSLEFVQSLCDTSYGLVDVFPIEDRKSALQESLREINIHVKEVQNTGGVCFPLGKGMYRVLHMPVDEAVLLNSREKAPYMICIEVLRCEMPSNFKEASSSQKLSQGGIPLANGDAFLQKPPPWAYPLWSAQEVYRNSNDRMSRSTAQAIDQAMTHVSEPKIKLVSLNLSVETRYNGQEGAEHDSDLEWVRVVLTADPGVRLEDIEDQAPPRKKEHRRVPSTVAMEEVKAAAAKGEAPLGLPLKGAGQDSSDAQPRANGITPKASDALSGELWEAKKDRVCKASIYGKLPGWDLRSIIVKSGDDCRQEHLAVQLISHFYDIFQEAGLPLWLRPYEVLCTSSYTALIETIPDTASLHSIKSRYPNISSLREFFNAKYEENSPSFKLAQRNFVESMAGYSLVCYFLQVKDRHNGNLLLDEEGHIIHIDFGFMLSNSPGGVNFESAPFKLTRELLEVMDSDAEGLPSEFFDYFKVLIKTF 1693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00660 1693 MobiDBLite consensus disorder prediction 1101 1156 - -
Tsu02g00660 1693 Gene3D - 1566 1693 IPR036940 GO:0016301
Tsu02g00660 1693 Gene3D Aspartate Aminotransferase, domain 1 383 574 IPR015422 GO:0003824
Tsu02g00660 1693 SUPERFAMILY ARM repeat 741 813 IPR016024 -
Tsu02g00660 1693 Pfam Phosphatidylinositol 3- and 4-kinase 1512 1691 IPR000403 -
Tsu02g00660 1693 MobiDBLite consensus disorder prediction 1172 1210 - -
Tsu02g00660 1693 MobiDBLite consensus disorder prediction 1058 1085 - -
Tsu02g00660 1693 MobiDBLite consensus disorder prediction 1101 1138 - -
Tsu02g00660 1693 ProSiteProfiles PIK helical domain profile. 647 827 IPR001263 -
Tsu02g00660 1693 MobiDBLite consensus disorder prediction 868 891 - -
Tsu02g00660 1693 Gene3D - 723 833 IPR042236 -
Tsu02g00660 1693 PANTHER BNAA02G34040D PROTEIN 1013 1690 - -
Tsu02g00660 1693 PANTHER BNAA02G34040D PROTEIN 688 943 - -
Tsu02g00660 1693 PANTHER PHOSPHATIDYLINOSITOL KINASE 1013 1690 IPR015433 GO:0046854|GO:0048015
Tsu02g00660 1693 PANTHER PHOSPHATIDYLINOSITOL KINASE 688 943 IPR015433 GO:0046854|GO:0048015
Tsu02g00660 1693 SUPERFAMILY PLP-dependent transferases 106 568 IPR015424 -
Tsu02g00660 1693 Gene3D - 127 358 IPR015421 GO:0003824
Tsu02g00660 1693 PANTHER BNAA02G34040D PROTEIN 947 1020 - -
Tsu02g00660 1693 PANTHER PHOSPHATIDYLINOSITOL KINASE 947 1020 IPR015433 GO:0046854|GO:0048015
Tsu02g00660 1693 MobiDBLite consensus disorder prediction 1172 1192 - -
Tsu02g00660 1693 MobiDBLite consensus disorder prediction 1139 1156 - -
Tsu02g00660 1693 Pfam Aminotransferase class-V 130 452 IPR000192 -
Tsu02g00660 1693 Gene3D - 1400 1565 - -
Tsu02g00660 1693 ProSitePatterns Phosphatidylinositol 3- and 4-kinases signature 1. 1515 1529 IPR018936 GO:0016301
Tsu02g00660 1693 MobiDBLite consensus disorder prediction 1455 1477 - -
Tsu02g00660 1693 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 1490 1693 IPR000403 -
Tsu02g00660 1693 SMART pi3k_hr1_6 1512 1693 IPR000403 -
Tsu02g00660 1693 SUPERFAMILY Protein kinase-like (PK-like) 1240 1689 IPR011009 -
Tsu02g00660 1693 MobiDBLite consensus disorder prediction 868 898 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00660 Tsu-Chr2 5573174 5588473 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00660 686 1689 Lipid Metabolism Gene Families AT5G09350 67.526 0.0 1377
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00660 K19801 - gmx:100778394 1652.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00660 02 5573174 5588473 Tsu02g00660 02 5573174 5588473 ECH
Tsu02g00660 02 5573174 5588473 Tsu07g01329 07 11634253 11644966 PCT