Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00644 ATGCTGCACCTGCACAACCTTCTTCCTCGCTCCGGGAAAGTATTATTTCTCCTTTGTCATCGTCATTTAAACAACTGGAAAAGTAGTTTTCAATTCGAAAAAACTATCAGATTCTTACACAACAGACACAGGAATATCCATTCTTCTCCACCTTCTATTGATCAATTAATTAATGCTCGTGTTATATATTCCGTTGCTCCATCCATGGGCCACAACCAGGAGGATCATCCAGAATCACATTTTAGAGTTCCTGCAATTGTCAATGCTTTGGGAGAAATGAAACTCACTTCAAAGTTTCGTGGCTCCGGGGTCATTGAACTTCAACATTTTAAGCCTGCTTCAACCGATGACATTGCAAGTGTGCATGCAAGAGCCTATGTTTCTGAGCTTGAAAAGATTGATTTCCATGTTTTTGCGCTTATTATGGTATTTATTGTGCAGACCTTCCAAGAGTCAATTGTAGCAGCTGGTGCTGGATTAGCTTTAGTTGACTCAGTGGTTGCAGCTTCAAAGATAAACAAAGATTCACCTACTGGTTTTGCTTTGATAAGACCACCAGGACATCACGCTATTCCACAAGGAGCTATGGGCTTCTGCATTTTTGGAAATGTGGCCATTGCGGCTCGTCATGCTCAGCGTGTTCATGGACTGAAGCGCGTGTTTATAATTGACTTTGATGTTCACCACGGAAATGGAACAAATGATGCTTTCTACAATGATCCAGATGTATTTTTCCTTTCCTTCCACCAAGATGGAAGCTATCCAGGTACAGGAAAATTTGATGAGCCAGACATCATTCTTGTTTCTGCTGGGTATGACGGCCACGTGTTGGATTCAATAGCTAATCTTCAATTAAGAACGGGAACGTATTACATGCTTGCGTCCAATATTAAACAACTAGCAAAAGACTTATGTGGCGGCCGATGCGTATTTTTCTTGGAAGGAGGATATAATCTCCAGTCGCTTTTGTATTCAGTGGCAGACACATTTCGCGCTCTTCTCGGGGACAAAAGCATGGCATCTGAGTTTGATGACCCAAACATTTTGTATGAAGAGCCAACAATAAAGGTTAAGCATGCAATTCAGAGGATAAAATGCATTCATTCCTTGTGA 1113 0.4133 MLHLHNLLPRSGKVLFLLCHRHLNNWKSSFQFEKTIRFLHNRHRNIHSSPPSIDQLINARVIYSVAPSMGHNQEDHPESHFRVPAIVNALGEMKLTSKFRGSGVIELQHFKPASTDDIASVHARAYVSELEKIDFHVFALIMVFIVQTFQESIVAAGAGLALVDSVVAASKINKDSPTGFALIRPPGHHAIPQGAMGFCIFGNVAIAARHAQRVHGLKRVFIIDFDVHHGNGTNDAFYNDPDVFFLSFHQDGSYPGTGKFDEPDIILVSAGYDGHVLDSIANLQLRTGTYYMLASNIKQLAKDLCGGRCVFFLEGGYNLQSLLYSVADTFRALLGDKSMASEFDDPNILYEEPTIKVKHAIQRIKCIHSL 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00644 370 SUPERFAMILY Arginase/deacetylase 71 337 IPR023696 -
Tsu02g00644 370 Pfam Histone deacetylase domain 76 262 IPR023801 -
Tsu02g00644 370 Gene3D Histone deacetylase domain 57 261 IPR037138 -
Tsu02g00644 370 PANTHER HISTONE DEACETYLASE 45 262 - -
Tsu02g00644 370 PANTHER HISTONE DEACETYLASE 263 369 - -
Tsu02g00644 370 CDD HDAC_classII 76 334 - -
Tsu02g00644 370 PANTHER HISTONE DEACETYLASE 14 263 369 - -
Tsu02g00644 370 PRINTS Histone deacetylase superfamily signature 219 234 IPR000286 -
Tsu02g00644 370 PRINTS Histone deacetylase superfamily signature 185 208 IPR000286 -
Tsu02g00644 370 PRINTS Histone deacetylase superfamily signature 263 273 IPR000286 -
Tsu02g00644 370 PANTHER HISTONE DEACETYLASE 14 45 262 - -
Tsu02g00644 370 Gene3D Histone deacetylase domain 262 368 IPR037138 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00644 Tsu-Chr2 5458936 5463526 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00644 - - cam:101515579 544.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00644 02 5458936 5463526 Tsu02g00644 02 5458936 5463526 ECH