Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00631 ATGGCACCATCAATCACTTCTACTGTTTCTTCCTTGAAAAGTGAAATTgaggataaaaaaattattgacttCAAATCACTTCATGAGGAAGCAAAAGTGCCAAAAGAGTTTATTTGGCCATCTGAGGATTTGGTTGAGACCATCAAAGAAGAGTTGAATGTACCTATCATTGATTTAGAAGCCATATTTAATGGTGATGATGTTGCTTTAGGAGCTACTGCAGAGATTGTGAGAGAAGCATGCATGAAACATGGCTTTTTCATGATCACAAATCATGGAGTTGACCAAAATTTGATAAATGATACTTATCAAGAATTTGTGTCCCTTTTTAAGCTTCCTTTAAATAGAAAGCTCAATGCAATGGGGGCTCCATGGGGTTACGCATGTGCTCATGCATCAAGGTACTCTACTAACTTGCCATGGAAAGAGACATTTACTTTCCAATACAAACACTATGATGAATCTGAGACACAAATTGTTGACTACTTCACTTCAGTTTTAGGTGATGATCACCAACATGCTGGGTTTGTTCTCCAAAAGTATTGTGAAGCAATGAAAAAATTATCTGGGGTTATTTTGGAGCTATTGGCCATTAGTTTGGGTGTGGATCGACTACATTACCGGAAGTTTTTCGAAGATGCAGAAACAATGATGAGGTGCAACTCTTACCCGCCTTGCAATAACGCTGGCACCCTTGGCACTGGTCCACATTGCGACCCAACTTCAATCACCATTCTTTTTCAGGACCAAGTTGGAGGTCTAGAAGCTTTTGTCGATAACAAATGGTTTGGGATTCACCCTCAACCTAATACCTTTGTCATTAACATAGGTGACACTTTCAAGgcaTTGACTAATGGAATATACAAGAGTTGTCTCCATAGGGTATTGACTAACAAAGAGAAGGACAGGAAGACTTTGGCTTTCTTTTTGTGtccaaaaaaggacaaaattgtAAGAGCACCAGATAATATTTTGGGAAGACAAGAGTCAAGGAATTATCCAGATTTCACATGGTCACAATATTTTGAGTTTACACAAAAGAAGCATAGAGCTGATCCAAACACTCTTCCAGATTTTGTCTCGTTTCTTAATTCCAACCAATCAAACATCTAA 1113 0.3702 MAPSITSTVSSLKSEIEDKKIIDFKSLHEEAKVPKEFIWPSEDLVETIKEELNVPIIDLEAIFNGDDVALGATAEIVREACMKHGFFMITNHGVDQNLINDTYQEFVSLFKLPLNRKLNAMGAPWGYACAHASRYSTNLPWKETFTFQYKHYDESETQIVDYFTSVLGDDHQHAGFVLQKYCEAMKKLSGVILELLAISLGVDRLHYRKFFEDAETMMRCNSYPPCNNAGTLGTGPHCDPTSITILFQDQVGGLEAFVDNKWFGIHPQPNTFVINIGDTFKALTNGIYKSCLHRVLTNKEKDRKTLAFFLCPKKDKIVRAPDNILGRQESRNYPDFTWSQYFEFTQKKHRADPNTLPDFVSFLNSNQSNI 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00631 370 Pfam 2OG-Fe(II) oxygenase superfamily 215 312 IPR044861 -
Tsu02g00631 370 Pfam non-haem dioxygenase in morphine synthesis N-terminal 54 153 IPR026992 -
Tsu02g00631 370 SUPERFAMILY Clavaminate synthase-like 29 351 - -
Tsu02g00631 370 Gene3D - 21 352 IPR027443 -
Tsu02g00631 370 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 213 312 IPR005123 -
Tsu02g00631 370 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 19 364 - -
Tsu02g00631 370 PRINTS Isopenicillin N synthase signature 77 94 - -
Tsu02g00631 370 PRINTS Isopenicillin N synthase signature 272 298 - -
Tsu02g00631 370 PANTHER GIBBERELLIN 20 OXIDASE 1-B-LIKE 19 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00631 Tsu-Chr2 5318658 5320438 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00631 19 348 Glycosyltransferase AT5G59530 25.575 1.11e-24 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00631 K05282 - gmx:100816834 447.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00631 02 5318658 5320438 Tsu02g00631 02 5318658 5320438 ECH